Pseudomonas alcaliphila: UYA_18415
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Entry
UYA_18415 CDS
T06680
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pall
Pseudomonas alcaliphila
Pathway
pall03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UYA_18415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pall03019
]
UYA_18415
Enzymes [BR:
pall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UYA_18415
Messenger RNA biogenesis [BR:
pall03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UYA_18415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-ProteinID:
APU31602
UniProt:
A0A1L7G3E8
LinkDB
All DBs
Position
4023912..4025360
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AA seq
482 aa
AA seq
DB search
MLKALKKMFGKAEDEQPQPAPSPVTAPAQSSDAEHKRPRQNKPARTASESAGDSPAQQQP
RPPKADKPRREHPAKPVSTWKLEDFVVEPAEGKTRFHDFKLAPELMHAIHDLGFPYCTPI
QAEVLGYTLKGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRE
LVVQIAKDAAELTKYTGLNVMQFVGGMDFDKQLKQLESRFCDILVATPGRLLDFNQRGEV
HLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPMKGDRQTLLFSATFTEDVMNLAKQWTV
NPAIVEIEPENVASDTVEQHVYAVASADKYKLLYNLISQNDWTRVMVFANRKDEVRRIEE
RLTRDGISAVQMSGDIPQHKRIRALEGFREGKIRVMVATDVAGRGIHVDAISHVINFTLP
EDPDDYVHRIGRTGRAGTSGTSISFAGEDDAFALPPIEALIGRKIQCEMPPDELLKPVPR
KH
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaagcactcaagaaaatgttcggcaaagccgaagacgagcagccacaaccagcg
ccgtcacccgtaacagcgcccgcccagagcagtgacgcagagcacaagcgtccccgccag
aacaagcccgcccgcactgccagcgagagcgcaggcgacagcccggcgcagcaacagccc
cgcccgcccaaggccgacaagccacgccgcgagcacccagccaagccagtaagcacctgg
aaactggaagatttcgtggtcgagccggccgaaggcaagacccgtttccatgacttcaag
cttgcccccgagctgatgcatgccattcatgatctgggtttcccctactgcacgccgatc
caggctgaggtactgggctacaccctcaagggccaggatgccattggccgcgcccagacc
ggtaccggcaagaccgccgcgttccttatctcgatcatcacccagctgctgcagaccccg
ccgccgaaagagcgctacatgggcgagccacgcgcgctgatcatcgcgccaacccgcgaa
ctggtggtgcagatcgccaaggacgctgccgagctgaccaaatacaccggcctgaatgtc
atgcagttcgtcggcggcatggacttcgacaagcagctcaagcaactggagtcgcgtttc
tgcgacatcctcgtggccaccccgggccgcctgctggacttcaaccagcgcggcgaagtg
cacctggacatggtcgaggtgatggtgctggacgaagccgaccgcatgctcgacatgggc
ttcatcccgcaggtgcgccagatcatccgccagacgccgatgaaaggtgaccgccagacc
ctgctgttctccgccaccttcaccgaagacgtgatgaacctggccaagcaatggacggtc
aaccccgccatcgtcgagatcgagccggagaacgtcgccagcgataccgtcgagcagcac
gtgtacgccgtagcctcggctgacaagtacaaactgctctacaacctgatcagccagaac
gactggacgcgggtcatggtcttcgccaaccgcaaggacgaagtacggcgcatcgaagag
cgcctgacccgcgacggtatcagcgccgtgcagatgtccggtgatatcccgcagcacaag
cgtatccgcgccctggaaggcttccgcgagggcaagatccgcgtcatggtcgccactgac
gtcgccggtcgcggcatccacgtcgatgccatcagccatgtgatcaacttcaccctgccg
gaagacccggacgactatgtgcaccgcatcggtcgtaccggccgcgccggcaccagcggc
acctcgatcagcttcgccggcgaggacgacgccttcgccctgccgccgatcgaagcgctg
atcggccgcaagatccagtgcgaaatgccgccggacgaactgctcaagccggtgccgcgc
aagcactga
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