KEGG   Pseudomonas alcaliphila: UYA_18415
Entry
UYA_18415         CDS       T06680                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
pall  Pseudomonas alcaliphila
Pathway
pall03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pall00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UYA_18415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pall03019]
    UYA_18415
Enzymes [BR:pall01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     UYA_18415
Messenger RNA biogenesis [BR:pall03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     UYA_18415
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25
Other DBs
NCBI-ProteinID: APU31602
UniProt: A0A1L7G3E8
LinkDB
Position
4023912..4025360
AA seq 482 aa
MLKALKKMFGKAEDEQPQPAPSPVTAPAQSSDAEHKRPRQNKPARTASESAGDSPAQQQP
RPPKADKPRREHPAKPVSTWKLEDFVVEPAEGKTRFHDFKLAPELMHAIHDLGFPYCTPI
QAEVLGYTLKGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRE
LVVQIAKDAAELTKYTGLNVMQFVGGMDFDKQLKQLESRFCDILVATPGRLLDFNQRGEV
HLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPMKGDRQTLLFSATFTEDVMNLAKQWTV
NPAIVEIEPENVASDTVEQHVYAVASADKYKLLYNLISQNDWTRVMVFANRKDEVRRIEE
RLTRDGISAVQMSGDIPQHKRIRALEGFREGKIRVMVATDVAGRGIHVDAISHVINFTLP
EDPDDYVHRIGRTGRAGTSGTSISFAGEDDAFALPPIEALIGRKIQCEMPPDELLKPVPR
KH
NT seq 1449 nt   +upstreamnt  +downstreamnt
gtgctcaaagcactcaagaaaatgttcggcaaagccgaagacgagcagccacaaccagcg
ccgtcacccgtaacagcgcccgcccagagcagtgacgcagagcacaagcgtccccgccag
aacaagcccgcccgcactgccagcgagagcgcaggcgacagcccggcgcagcaacagccc
cgcccgcccaaggccgacaagccacgccgcgagcacccagccaagccagtaagcacctgg
aaactggaagatttcgtggtcgagccggccgaaggcaagacccgtttccatgacttcaag
cttgcccccgagctgatgcatgccattcatgatctgggtttcccctactgcacgccgatc
caggctgaggtactgggctacaccctcaagggccaggatgccattggccgcgcccagacc
ggtaccggcaagaccgccgcgttccttatctcgatcatcacccagctgctgcagaccccg
ccgccgaaagagcgctacatgggcgagccacgcgcgctgatcatcgcgccaacccgcgaa
ctggtggtgcagatcgccaaggacgctgccgagctgaccaaatacaccggcctgaatgtc
atgcagttcgtcggcggcatggacttcgacaagcagctcaagcaactggagtcgcgtttc
tgcgacatcctcgtggccaccccgggccgcctgctggacttcaaccagcgcggcgaagtg
cacctggacatggtcgaggtgatggtgctggacgaagccgaccgcatgctcgacatgggc
ttcatcccgcaggtgcgccagatcatccgccagacgccgatgaaaggtgaccgccagacc
ctgctgttctccgccaccttcaccgaagacgtgatgaacctggccaagcaatggacggtc
aaccccgccatcgtcgagatcgagccggagaacgtcgccagcgataccgtcgagcagcac
gtgtacgccgtagcctcggctgacaagtacaaactgctctacaacctgatcagccagaac
gactggacgcgggtcatggtcttcgccaaccgcaaggacgaagtacggcgcatcgaagag
cgcctgacccgcgacggtatcagcgccgtgcagatgtccggtgatatcccgcagcacaag
cgtatccgcgccctggaaggcttccgcgagggcaagatccgcgtcatggtcgccactgac
gtcgccggtcgcggcatccacgtcgatgccatcagccatgtgatcaacttcaccctgccg
gaagacccggacgactatgtgcaccgcatcggtcgtaccggccgcgccggcaccagcggc
acctcgatcagcttcgccggcgaggacgacgccttcgccctgccgccgatcgaagcgctg
atcggccgcaagatccagtgcgaaatgccgccggacgaactgctcaagccggtgccgcgc
aagcactga

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