Pseudooceanicola algae: PSAL_022020
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Entry
PSAL_022020 CDS
T06943
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
palw
Pseudooceanicola algae
Pathway
palw00521
Streptomycin biosynthesis
palw00523
Polyketide sugar unit biosynthesis
palw00541
O-Antigen nucleotide sugar biosynthesis
palw01100
Metabolic pathways
palw01110
Biosynthesis of secondary metabolites
palw01250
Biosynthesis of nucleotide sugars
Module
palw_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PSAL_022020 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PSAL_022020 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PSAL_022020 (rfbC)
Enzymes [BR:
palw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PSAL_022020 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF2442
Motif
Other DBs
NCBI-ProteinID:
QPM90959
UniProt:
A0A418SL19
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All DBs
Position
complement(2363749..2364306)
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AA seq
185 aa
AA seq
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MDVTATRLPEVLLLTPKRFGDERGFFSESWNRRTMRDAGLDIDFVQDNHSLSSQAGTLRG
LHYQAPPHAQGKLVRCGRGRLFDVAVDFRKGSPRFGQWVGVDLSFDNGHQLWIPPGFLHG
FVTREDATEIVYKCTDHYAPEADGAVHWDSLDIDWGVGEPVLSNKDAAAPTWQQVESPFD
MEGGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgactgcaacccgtttgcccgaagtgctgcttctcactccgaagcggttcggg
gatgagcgcggctttttcagcgaaagctggaaccggcggaccatgcgcgatgccgggctc
gatatcgatttcgtgcaggacaatcattcactttccagccaggccggcaccttgcgagga
ttgcactaccaggccccgccacatgcgcagggcaagctggtgcgttgcgggcgcgggcgg
ctgttcgatgtggcggttgatttccgcaagggctcgccccggttcgggcaatgggtcggg
gtcgatctgagttttgacaatggtcaccaactgtggatcccgccgggctttctgcatggt
ttcgtcacccgcgaggatgcgaccgaaatcgtctacaagtgtaccgatcactatgcgcca
gaagcggatggcgcggtgcattgggacagtctggacatcgattggggcgtcggcgagccg
gtgctgtcgaacaaggacgccgccgcaccgacctggcagcaggtcgagagcccgtttgat
atggagggcgggtcatga
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