Populus alba (white poplar): 118029203
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Entry
118029203 CDS
T07314
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palz03009
]
118029203
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118029203
Ribosome biogenesis [BR:
palz03009
]
Eukaryotic type
Pre-60S particles
Helicases
118029203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
118029203
NCBI-ProteinID:
XP_034888912
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MGKEPLVSSMAELKRKQQVKKKSKSCGFESLNLSPNVYRGIKRKGYRVPTPIQRKTMPLI
LAGIDVVAMARTGSGKTAAFLLPMLEKLKQHLPQSGVRALILSPTRDLALQTLKFAKELG
RFTDLRISLLVGGDRMESQFEDLSQNPDIIIATPGRLMHHLSEIDDMSLKTVEYVVFDEA
DSLFGMGFAEQLHKILTQLSENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDVDTKISP
DLKTVFFTLRQEEKYAALIYLVRDHISTDQQTLIFVSTKHHVEFLNVLFKEEGIEPSVCY
GDMDQDARKIHVSRFRARKTMLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRV
ARAGRTGTAFSFVTSEDMPYLLDLHLFLSKPVKAAPTEEEVLQDIDGVMNKIDQAFANGE
TVYGRFPQTVLDLVSDRVREIIDSSAELTSLQKACTNAFRLYTKTKPSPAKESIKRVKDL
PCEGLHPIFKNVLEGGELMALAFSERLKTFRPKQTILEAEGESAKSKNLQGPGQWVDVMK
RKRAIHEEVINLVQQQRSNKLADKKEVETEITSDEKEKKVVRGSKRKAKSFKDEEYFISS
IPTNHHSEAGLSMRGNDGFGSNRLENAVLDLVADDSGGLQKQKTVYHWDKRNKKYIKLNN
GDRVTASGKIKTESGAKVKATKTGIYKKWKEGSHRKISLRGTNNDGNAEEPTSFSGNRQF
RGNDRNFRGSKKQHSLPNANVRSEIKDLEQVRKDRQKKADRVSYMKSKGSKSKKFGKNGK
RGKARK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagaacccttagtcagctccatggcagagctaaaacgcaaacaacaagtcaaa
aagaaatcaaaatcctgtggcttcgaatcccttaacctaagccccaatgtctatcgagga
atcaagcgtaagggttatcgcgtccccacccctatccaacgtaagaccatgcctcttatc
ctcgccggcatcgacgtcgtcgctatggcccgcactggatccggcaagaccgccgccttt
ctcctccccatgttagagaagttaaaacagcacctgcctcaaagtggtgttagggctctc
atactgtcgcctactagggatttggcgttgcaaactttgaaattcgctaaagaacttggc
agattcactgatcttagaattagtttattggttggtggagatcgtatggagagtcaattt
gaggatttatcgcaaaaccctgatattattattgccactcctggtagattaatgcaccat
ttgtctgagattgatgacatgtcattgaaaacggttgaatatgttgtttttgatgaagcc
gatagtctcttcggtatgggttttgctgagcagttgcataaaattcttacccagctgagc
gagaatcgtcagactttgctttttagtgcaactttgcccagtgcacttgcggagtttgcc
aaggcaggtttaagagatcctcagcttgttcggcttgatgtggatactaagattagtcct
gatttgaaaactgtgttttttaccttgcgccaagaggaaaaatatgcagcgttgatttat
ttggtaagagatcatattagtaccgatcaacagacattgatatttgtttctacgaaacat
catgttgagtttctaaatgttctgtttaaagaagagggcattgagccttcggtttgttat
ggtgatatggatcaagatgctcgtaagattcatgtatcgaggttcagggcacggaagact
atgttgttgattgtgacagatgttgcagctaggggcattgatattccattgcttgataat
gtgataaattgggacttccctccaaaacctaagatttttgtgcatcgtgtggggagagtt
gctagggcaggtcggactggaacggccttttctttcgtgacatctgaagacatgccttac
cttttagatcttcatctgtttctctcaaagccagtcaaggctgctcccactgaggaggag
gttttgcaggatatagatggagtaatgaacaaaattgatcaagcatttgcaaatggagag
actgtttatgggcgtttcccccagactgtccttgatcttgtgtcagatagagttcgtgaa
atcattgattcatcagctgaactaacttctttacagaaagcctgtacaaatgcttttcgt
ttgtatacaaagaccaaaccatcacctgcaaaggagtccattaaaagagtgaaggattta
ccttgtgaaggattacacccaatattcaaaaatgtcttggaaggtggtgaattaatggca
cttgccttttctgagcgtttgaaaactttcagacccaagcagactatattggaagctgaa
ggtgaatcagccaagtcaaagaatctgcagggtcctggtcagtgggttgatgtcatgaag
agaaaaagagctattcatgaggaggtcattaatttggtacagcagcagcgctctaacaag
ctggcagacaagaaggaagttgaaactgaaattacttcagatgaaaaggagaaaaaagtg
gttcgtggttctaaaagaaaggcaaagagtttcaaggatgaggaatacttcattagttca
ataccaactaatcatcattcagaggcaggcctctcaatgagaggaaatgatggctttgga
tcaaataggttggaaaatgctgtgttggatcttgttgcagatgatagtggggggttacag
aaacagaaaaccgtataccactgggataagaggaataaaaagtacatcaaactaaacaat
ggtgatcgtgttacagccagtggaaagataaaaacagaaagtggtgctaaagtaaaagca
accaagactgggatatacaagaagtggaaagaagggtcacacaggaaaatatctcttaga
ggaacaaataacgatgggaatgctgaggaacccacaagcttctcaggaaaccgccaattc
cgagggaatgacagaaacttcagagggagcaaaaagcagcactctctgcctaatgccaat
gtgcgttcagaaattaaagatcttgaacaagttcggaaggacaggcagaagaaggcagac
agagtttcttatatgaagagcaaaggttcaaagagtaaaaagtttggtaaaaatggaaaa
aggggcaaagctaggaagtaa
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