Pantoea ananatis LMG 20103: PANA_1219
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Entry
PANA_1219 CDS
T01195
Symbol
uvrB
Name
(GenBank) UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pam
Pantoea ananatis LMG 20103
Pathway
pam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PANA_1219 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pam03400
]
PANA_1219 (uvrB)
DNA repair and recombination proteins [BR:
pam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PANA_1219 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PANA_1219 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
SBDS_domain_II
UB2H
AAA_30
Helicase_C_2
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADD76386
UniProt:
D4GMQ1
LinkDB
All DBs
Position
1382732..1384753
Genome browser
AA seq
673 aa
AA seq
DB search
MSKDFKLNSAFKPSGDQPEAIRRLEAGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMIIDQRSILRRLSELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDMALRVELFDEEVERLSLFDPLTGQVESVVPR
FTIYPKTHYVTPRERILQAMEDIKVELADRRKTLLENNKLLEEQRITQRTQFDLEMMGEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGKYELEKSGDEVIDQVVRPTGLLD
PILEVRPVATQVDDLLSEIRQRVTINERVLVTVLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMARAIEETERRREKQQRHNEENGIVPQGLNKKITDILELG
NNVVKTRGKAKPAKRNAAEADADYLALSPQALQKKIHELEGQMQQHAQNLEFEQAAGLRD
QLQELRTLFIAVS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagattttaaactgaactccgctttcaagccttccggcgatcagccagaggcg
atccgtcgtcttgaagccggactggaagatggcctggcgcaccagacgctattaggcgtt
accggatcgggtaaaacctttaccgtggctaacgtgatcgccgatcttaaccggcccacc
atggttctggcaccgaacaaaacgctggcggcccagctgtatggtgagatgaaggagttt
ttcccggacaacgcggtggagttttttgtctcctattacgattactaccagcctgaagcc
tatgtcccaagctctgacacctttatcgaaaaagacgcctcggttaacgaacacatcgag
cagatgcgtctttccgccactaaagcattactggagcggcgtgatgttatcgtcgttgcc
tcagtgtcggccatttacggtctgggcgatcccgatctttatctgaaaatgatgctgcac
ctgacgcgcggtatgatcatcgaccagcgcagcattctgcgtcgcttgtcagagctgcag
tacacgcgcaacgaccaggcgtttcagcgcggcaccttccgggtgcgtggcgaggtcatc
gatatttttccggcagagtccgatgatatggcactgcgggtggagttatttgacgaagag
gtcgagcgcctgtccctgtttgatccgctcaccgggcaggttgaatcggttgtaccgcgt
tttaccatctatccgaaaacgcactacgttacgccgcgtgagcgcattctgcaggccatg
gaagacatcaaggttgagctggccgaccggcgtaaaaccctgctggaaaacaacaaactg
ctggaagagcagcgcatcactcagcgcacccagtttgatctggagatgatgggcgagctg
ggctactgctccggcatcgaaaactactcgcgttacctgtcaggccgtgggccgggagag
gcgccgcctacgctgtttgactatctccccgcagatggccttctggtggtggatgagtcc
cacgtcacgattccccaaattggcggcatgtaccgtggcgaccgtgcacgtaaagagacg
ttggtagagtacggtttccgactgccttcggcgcttgataaccgtccgatgaagttcgaa
gagtttgaagcgctggcccctcagacgatctatgtgtcggcaacgccgggcaaatatgag
ctggagaaatccggcgacgaggtcatcgatcaggtggtgcgtccaaccggcctgctggat
ccgattcttgaggtccgccccgtggcgacgcaggttgatgatttactgtctgagatccgc
cagcgcgttacgatcaacgagcgcgtcctggtgaccgtcctgactaaacgcatggcggaa
gatctgacagagtaccttgaagagcacggtgaaaaggtgcgctatctgcactcggatatc
gacacggtggaaaggatggaaatcattcgtgacctgcgtctgggcaaatttgacgtactg
gttgggatcaacctgttgcgagaagggctggacatgcctgaggtatcgctggtggccatt
ctggatgcggacaaagagggcttcctgcgttcggagcgttcgctgattcagaccattggc
cgtgcggcacgtaatattaacggtaaagcgattctgtatggcgacaagatcacgccttca
atggccagagcgattgaagaaacggaacgccgccgtgagaagcagcagcggcataacgaa
gaaaacggcatcgtgcctcagggcctgaacaagaaaatcaccgatattctggaactgggc
aataacgtggtgaaaacgcgtggtaaagccaagcccgctaagcgcaatgccgctgaggca
gacgccgattacctggcgttgtccccccaggcgttgcagaaaaagatccacgagctggaa
gggcagatgcagcaacatgcgcaaaacctggagttcgaacaggcggcgggcctgcgcgat
cagctgcaggaattgcgcacattgtttattgcggtgtcctga
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