KEGG   Pseudomonas amygdali: BKM19_008250
Entry
BKM19_008250      CDS       T05354                                 
Name
(GenBank) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
pamg  Pseudomonas amygdali
Pathway
pamg03030  DNA replication
pamg03430  Mismatch repair
pamg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BKM19_008250
   03430 Mismatch repair
    BKM19_008250
   03440 Homologous recombination
    BKM19_008250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pamg03032]
    BKM19_008250
   03400 DNA repair and recombination proteins [BR:pamg03400]
    BKM19_008250
Enzymes [BR:pamg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BKM19_008250
DNA replication proteins [BR:pamg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BKM19_008250
DNA repair and recombination proteins [BR:pamg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BKM19_008250
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: AVB13596
LinkDB
Position
complement(1556021..1556449)
AA seq 142 aa
MTQVDFYILPSADPAARLDFACKLTEKAWRLGHKVYLHCSDAAQREDLDARLWRFRGEVF
LPHGDAESDHDAAVVLGLGDDSGEHSDLLVNLDLSIPAFFKRFARVAEVVVEDPAIRLAA
RESFRSYREQGYPPQDHRLQRL
NT seq 429 nt   +upstreamnt  +downstreamnt
atgacccaagtcgatttttacatcctgcccagcgccgatcctgccgcgcgcctggacttt
gcctgcaaactcacggaaaaagcctggcgtttgggccacaaggtctatctgcattgcagc
gatgcagcgcagcgtgaggacctcgatgcccggctctggcgtttcagaggtgaagtgttt
ctaccccatggcgacgccgagagcgatcacgatgctgccgtggtactgggcctgggcgac
gactcgggcgaacacagtgacctgctggtcaacctcgacctgagcattccggccttcttc
aaacgtttcgcccgcgtggccgaagtcgttgtcgaagaccccgccatacgtcttgccgca
cgcgagagtttccgttcctatcgcgaacagggctatcctccgcaagatcaccgactgcag
cgcctttga

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