Pseudomonas amygdali: BKM19_008250
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Entry
BKM19_008250 CDS
T05354
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg03030
DNA replication
pamg03430
Mismatch repair
pamg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKM19_008250
03430 Mismatch repair
BKM19_008250
03440 Homologous recombination
BKM19_008250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pamg03032
]
BKM19_008250
03400 DNA repair and recombination proteins [BR:
pamg03400
]
BKM19_008250
Enzymes [BR:
pamg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKM19_008250
DNA replication proteins [BR:
pamg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKM19_008250
DNA repair and recombination proteins [BR:
pamg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKM19_008250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
AVB13596
LinkDB
All DBs
Position
complement(1556021..1556449)
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AA seq
142 aa
AA seq
DB search
MTQVDFYILPSADPAARLDFACKLTEKAWRLGHKVYLHCSDAAQREDLDARLWRFRGEVF
LPHGDAESDHDAAVVLGLGDDSGEHSDLLVNLDLSIPAFFKRFARVAEVVVEDPAIRLAA
RESFRSYREQGYPPQDHRLQRL
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagtcgatttttacatcctgcccagcgccgatcctgccgcgcgcctggacttt
gcctgcaaactcacggaaaaagcctggcgtttgggccacaaggtctatctgcattgcagc
gatgcagcgcagcgtgaggacctcgatgcccggctctggcgtttcagaggtgaagtgttt
ctaccccatggcgacgccgagagcgatcacgatgctgccgtggtactgggcctgggcgac
gactcgggcgaacacagtgacctgctggtcaacctcgacctgagcattccggccttcttc
aaacgtttcgcccgcgtggccgaagtcgttgtcgaagaccccgccatacgtcttgccgca
cgcgagagtttccgttcctatcgcgaacagggctatcctccgcaagatcaccgactgcag
cgcctttga
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