Pseudomonas amygdali: BKM19_011435
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Entry
BKM19_011435 CDS
T05354
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg03030
DNA replication
pamg03430
Mismatch repair
pamg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKM19_011435
03430 Mismatch repair
BKM19_011435
03440 Homologous recombination
BKM19_011435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pamg03032
]
BKM19_011435
03400 DNA repair and recombination proteins [BR:
pamg03400
]
BKM19_011435
Enzymes [BR:
pamg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKM19_011435
DNA replication proteins [BR:
pamg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKM19_011435
DNA repair and recombination proteins [BR:
pamg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKM19_011435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
AAA_30
AAA_19
TIP49
PIF1
AAA_18
AAA_2
TsaE
nSTAND3
AAA_7
DUF3646
Rad17
SKI
AAA_24
Herpes_Helicase
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AVB14136
UniProt:
A0A2G4DFV7
LinkDB
All DBs
Position
2248858..2251071
Genome browser
AA seq
737 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQAHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAVDVRAM
LGTLDHGQVFDVLTALLEGDARGVLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADNDDAPRQPLKPVGISQATVDSRKAVADATPVASVAPAVSTAPVMAAPDPAFEALPPAT
APMPTAAVRAEPAAQPESQPQAQPEPVEEVDLPWNEPKAPVAEKNAESAPDTGTVAEPVA
EPVLETVSEQPDLTPMPTPAPASPVPDAPEAEPAQPVAEQQVTPAMLEAIPDSAYLSMNP
DSMSSNSGPMGRDDEPPADDDYVEPDIDIDPASYSYLDELAQESVVELEAVEPEPAPAAK
PATGLAADWLEVFPKLPISGMTGSIAANCTLMAVDGDKWLLHLDPAHSALFNSTQQRRLN
DALNQYHGRTINLSIELIKPEQETPAQAASRLRAERQRQAEASIQADPYIQQMLQQFGAV
IREDTIQPVDAPAVQPQ
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
caggctcatgtgttgaaggccctgatcaacgcgctggacagccagcgcctgcaccatgcc
tatttgttcaccggcacgcgaggcgtcggcaagaccactatcgcgcggatcatcgccaag
tgcctgaactgcgagaccggcatcacctccacgccctgtggcacttgctcggtgtgcaaa
gagatcgatgaaggtcgtttcgtcgacctgatcgagatcgacgccgccagccgcaccaag
gtcgaagacacgcgcgaactgctggataacgtgcagtacgcgccaagtcgcggtcgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagtcactcgttcaacgccttgctc
aagacgcttgaagagccgccgccctacgtcaagttcatcctcgctaccaccgatccgcag
aagctgcctgcgaccattctgtcgcgctgcttgcagttctcgctgaaaaacatgacgccc
gaacgtgtggtcgaacatctgacccatgtactgggcgtcgagaatgtgccgttcgaagac
gatgcgctgtggctgctcgggcgcgctgccgacggttcgatgcgtgacgcgatgagcctg
accgatcaggccattgcctttggtgaaggcaaggtcatggctgtcgatgtgcgcgccatg
ctcggcacgctggatcacggtcaggtgttcgatgtgctgactgcgttgctggaaggcgac
gctcgcggtgtgctggaggcggtacgccacctggccgagcaggggcctgactggaatggt
gtgctctcggaaattctcaatgttctgcaccgcgtggcgattgcccaggcgttgcccgaa
ggcgtcgacaacgggcacggcgaccgcgaccgggtgttggcgctggcccaggcattgcct
gccgaagacgtgcagttttattaccagatgggtctgattggtcgtcgtgacttgccgctg
gccccggatccgcgtggcggtttcgagatggtcctgctgcgcatgctggcgttccgcccg
gccgataacgacgatgcgccgaggcaaccgctaaagccggtggggatcagccaggccacg
gttgattcccgaaaagcagtggccgatgcgacacctgttgcatcggtagctcccgcagtt
tcaacagcaccggtgatggctgcgcccgatccggccttcgaagcgctgccgccagccacc
gccccgatgccgaccgctgctgtacgagctgagcccgcagcacagccagaatcacagccg
caagcacagcccgagccggtcgaagaagtcgatctgccgtggaatgagccaaaggcaccg
gttgccgaaaaaaacgctgaatccgcacctgacactggcactgttgcagaaccggtagcc
gagccggttctggagactgtctccgaacagccagacctcacgccaatgccgacgcctgcg
cccgccagcccagtgccagacgcgccggaggcggaacctgcgcagccggttgccgagcag
caggtgacacctgcgatgcttgaagccatccctgattccgcctatctgtccatgaatccg
gattcgatgtcttcgaattccggcccaatggggcgcgatgacgagccgccagcggatgac
gattacgtcgagccggatatcgacatcgacccggcgtcctatagctatctggatgaactg
gcccaggagagcgtcgtcgagcttgaagcggtcgagcccgagcccgctccggccgccaaa
ccagccaccggccttgctgccgactggctggaggtattccccaaactgccgatctccggc
atgaccggcagcattgccgccaactgcaccttgatggcggtcgatggcgataagtggctg
ctgcacctggacccggcgcacagcgccctgttcaactcaacccagcagcgccgcctgaac
gatgcgttgaaccagtatcatggtcgcacgatcaatctgagtatcgagctgatcaagccc
gagcaggaaactcctgcccaggctgcttcgcgactgcgtgccgagcgtcagcgtcaggcc
gaagcctcgatccaggccgacccgtatatccagcagatgttgcagcagtttggcgctgtt
atccgggaagatactatccagcccgtagacgcgcctgcggtgcagcctcaataa
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