Pseudomonas amygdali: BKM19_023725
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Entry
BKM19_023725 CDS
T05354
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pamg
Pseudomonas amygdali
Pathway
pamg01501
beta-Lactam resistance
pamg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BKM19_023725
01503 Cationic antimicrobial peptide (CAMP) resistance
BKM19_023725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pamg02000
]
BKM19_023725
01504 Antimicrobial resistance genes [BR:
pamg01504
]
BKM19_023725
Transporters [BR:
pamg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
BKM19_023725
Antimicrobial resistance genes [BR:
pamg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BKM19_023725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AVB16221
UniProt:
A0A2G4DAZ0
LinkDB
All DBs
Position
4866695..4869829
Genome browser
AA seq
1044 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLVGALSVSSLPINQYPSIAPPAIGIQVTYPGASAQTVQDT
VVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFNQGTNPDTAQVQVQNKLNLATPLLPQ
EVQQQGIRVTKAVKNFLMVIGLVSEDGSMGKEDLANYIVSNMQDPISRTSGVGDFQVFGS
QYAMRIWLDPAKLNNFQLTPVDVKNAITAQNVQVSSGQLGGLPSISGQQLNATIIGKTRL
QTAEQFGNIFLKVNTDGSQVRLKDVATVGLGAENYSTDSQFDGKPASGLAIKLATGANAL
DTAKAIRATVSSLEPFFPPGMKVVYPYDTTPVVSESINGVVHTLIEAIVLVFLVMYLFLQ
NFRATVITTMTVPVVLLGTFGILAAFGFTINTLTMFGMVLAIGLLVDDAIVVVENVERVM
EEEKLSPRDATIKSMTQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMAL
SVVVALIFTPALCATMLKPIDEKTHGQPKRGFFGWFNRTFDRSVLSYERGVGNMLKHKWP
AYLGYILICAGMVWMFMRIPAAFLPEEDQGVIFAQIQTPAGSSTERTQEVIDNMREYLLT
KESGAVKSVFSVNGFNFAGRGQSSAIAFVMLKPWEERDSNNSVFELAKRAQGYFFSLRDA
MVFAVVPPSVLELGNATGFDVYLQDQGGVGHDKLMEARNQFLGMAAQSKILAGVRPNGLN
DEPQYQLIIDDERASALGITLSDINNTLSIALGGSYVNDFIDRGRVKKVYIQGDAGARMT
PEDLKKWYVRNSSGEMVPFSAFASGKWTYGSPKLSRYNGVAAEEVLGTPAPGYSSGEAMA
EVEALAKKLPQGIGISWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPIAVI
LVVPLGVIGALMATSLRGLSNDVFFQVGLLVTVGLAAKNAILIVEFAKELHEQGKSLVDS
AIEACRMRLRPIIMTSMAFILGVVPLAISTGAGSGSQHSIGTGVIGGMITAVILAIFWVP
LFFVSVSGLFKSKKKHISHDEAGQ
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaattctttattgatcgacccatttttgcctgggttattgccctcgtgatcatg
ctggtcggtgcgctgtcggtttccagcctgccgatcaaccagtacccgagcatcgcacca
ccagccatcggtattcaggttacctatccgggcgcttctgcccagacggtgcaggacact
gtggtgcaggtgatcgagcaacagctcaacggtatcgacaacctgcgttatgtgagctcg
gaaagtaactccgacggcagcatgaccattaccgcgaccttcaatcagggtaccaaccct
gatacggcgcaggttcaggtgcagaacaagctcaacctcgcgaccccgctgttgccacag
gaagtgcagcaacagggtatccgcgtgaccaaggcagtgaagaacttcctgatggtgatc
ggcctggtgtccgaagacggcagcatgggcaaggaagacctggccaactacatcgtgtcg
aacatgcaggacccgatttcccggacctccggtgtgggtgacttccaggtgttcggttcg
cagtacgccatgcgtatctggctggacccggcaaagctgaacaacttccagctgactccg
gtggacgtgaaaaacgcgatcaccgcgcagaacgtccaggtatcgtccggccagttgggt
ggcctgccgtccatcagcggccagcagctgaacgccacgatcatcggcaagacgcgtctg
cagaccgccgagcagttcggcaacatcttcctcaaggtcaacaccgacggttcgcaggtt
cgcctcaaggacgtcgcgactgtcggcctgggcgcagagaactacagcaccgactcgcag
ttcgacggtaaaccggcatcgggtctggcaatcaaactcgcgaccggtgccaacgcactg
gacaccgccaaggctattcgcgcgaccgtttcgtcgctggagccgttcttcccgccaggc
atgaaagtcgtgtacccgtatgacaccacgccagtggtcagcgaatcgatcaatggtgtg
gtgcacaccctgatcgaagcgatcgtgctggtgttcctggtgatgtacctgttcctgcag
aacttccgcgccacggtcatcacgaccatgaccgtaccggtagtattgctgggtacgttc
ggcatcctcgcggcattcggcttcaccatcaacaccctgaccatgttcggtatggtgctg
gccatcggcttgctggtggacgatgcgattgtggtggtagaaaacgtcgagcgggtcatg
gaggaggaaaagctctccccgcgcgacgccacgatcaaatccatgacccagatccagggt
gcgctggtcggtattgcgctggtgctgtcggcggttctgctgcccatggcgttcttcggc
ggctctaccggggtgatctacaaacagttctcgatcaccatcgtctcggccatggccctg
tcggtggttgtcgccctgatcttcaccccggcgctgtgcgccaccatgctcaagcctatc
gacgagaagacccacggccagccaaaacgtggtttcttcggctggttcaaccgcaccttt
gaccgcagcgttctgagctacgaacgtggcgtcggcaacatgctcaagcacaaatggccg
gcgtatctgggctatatcctgatctgcgcaggcatggtctggatgttcatgcgtatcccg
gcagcgttccttccggaagaagatcagggcgtcatctttgcccagatccagaccccggca
ggctcctctaccgagcgtacgcaggaagtcatcgacaacatgcgtgaatacctgctgacc
aaggaaagcggtgcagtgaagtcggtgttctcggtaaacggcttcaactttgcgggccgc
ggtcaaagctcggcgattgcgttcgtcatgctcaagccgtgggaagaacgtgattccaac
aacagcgtcttcgaactggccaagcgcgctcagggctatttcttcagcctgcgcgacgca
atggtgttcgcggtcgttccaccgtctgttctcgagctgggtaacgccacaggtttcgac
gtttacctgcaggatcagggcggcgtgggtcacgacaaactgatggaggcgcgtaaccag
ttcctcggcatggcagcgcagagcaagattctcgcaggcgtgcgtccgaacgggctgaat
gacgaaccgcaataccagttgatcatcgacgacgaacgcgccagtgcgctgggcattacc
ctgtcggacatcaacaacacactgtccatcgcgttgggcggcagctacgtcaatgacttc
atcgaccgtggccgtgtgaagaaggtgtacatccagggcgatgcgggtgcccgtatgacg
cctgaagacctcaagaagtggtacgtgcgcaacagctcgggtgaaatggtgccgttctcg
gccttcgccagcggcaaatggacctacggctcaccgaaactgtcgcgctacaacggcgtg
gcagcagaggaagtgctcggtactcctgccccgggttacagcagcggcgaggcgatggcc
gaggtagaagccctggccaagaaactgccgcaaggtatcggcatttcgtggaccggtctg
tcctacgaggaacgtttgtccggctcgcaggcccctgccctctacgcgctgtcgttgctg
gtggtgttcctgtgtctggcggcgctgtatgaaagctggtcgatcccgatcgcggtcatc
ctcgtggtgccgctgggggttatcggtgcactgatggcaaccagcctgcgtggcctgtcc
aacgacgtgttcttccaagtgggcttgctggtgacggtgggtctggcggcgaagaacgcc
attctgatcgtcgagttcgccaaagagctgcacgaacagggcaagagcctggtcgactcg
gcaatcgaggcgtgccgcatgcgtctgcgcccgattatcatgacgtccatggcgtttatc
ctcggcgttgtgccgctggcaatctccacgggcgcaggttcaggtagtcaacattcgatc
ggtactggtgtaattggcggtatgatcaccgccgttatcctggcgatcttctgggtgccc
ctgttctttgtctcggtttcagggctcttcaagagcaagaagaaacatatttcacacgat
gaggctggccaatga
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integrated database retrieval system
