Paracoccus aminophilus: JCM7686_1603
Help
Entry
JCM7686_1603 CDS
T02792
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pami
Paracoccus aminophilus
Pathway
pami03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JCM7686_1603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pami03400
]
JCM7686_1603
Enzymes [BR:
pami01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JCM7686_1603
DNA repair and recombination proteins [BR:
pami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JCM7686_1603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AGT08704
UniProt:
S5XN34
LinkDB
All DBs
Position
complement(1594094..1595674)
Genome browser
AA seq
526 aa
AA seq
DB search
MELFDDEPENTETASNAHEFTVSEISGAVKRSIEDQFGRVRVRGEVGRVSRPASGHLYFD
LKDDRSVLNAVTWKGQAARLITRPEEGLEVIATGKLTTFPGQSKYQMIVDQIEPAGAGAL
MMMLEKRKKALAAEGLFDESRKRPLPYLPEVIAVVTSPSGAVIRDILHRLRDRFPSRVLL
WPVAVQGQDCAPQVTAAIRGLNALEKGGPIPRPDLIIVARGGGSLEDLWGFNEESVVRAA
AESQIPLISAVGHETDTTLIDYASDRRAPTPTAAAEIAVPVRADLALRLGEMHSRMGRAA
RARIEHPGQRLRDLSRALGRPQSLTDPARQRFDLFAGRLEPALRQFTRTRRERLNALGLP
VALLRSFTRSGTQRLAALTQKLAPATKRGLTLRQERIQRLGQSLTNSRARLLGEASRGLT
RNRDTFEKLTTRLDAAMTRSLQPRRERLDRLDRLRQTLGYRETLKRGFAVVHGPKGLLTS
VETARQTPAFEIEFHDGRLPAQPASPPEPAPAKPRKKKSDGQQSLF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagctctttgacgacgagccggaaaacaccgagaccgcctcgaatgcgcatgagttc
accgtctcggaaatctcgggcgcggtgaagcgctcgatcgaggatcaattcggccgcgtc
cgtgtgcggggcgaggtcgggcgcgtctcgcgtcccgcctcgggccatctttacttcgac
ctcaaggatgaccgctcggtcctcaatgccgtgacctggaaagggcaggcggcacggctc
atcacccggcccgaagaagggctcgaggttatcgcgaccggcaagctcaccaccttcccg
ggccagtccaaataccagatgatcgtcgatcagatcgaacccgcaggggcgggcgcgctg
atgatgatgctcgaaaagcgcaagaaggcgctcgccgccgaagggcttttcgacgagagc
cgcaagcgcccgctgccctatctgcccgaggtgatcgcggtcgtgacctcgccctcgggc
gcggtgatccgcgacatcctccaccgcctgcgcgaccgcttccccagccgcgtgctgctt
tggccggtggcggtgcaggggcaggattgcgcgccgcaggtgacggcggcgatccggggg
ctcaatgcgctggaaaagggcggtccgatcccgcgccccgatctgatcatcgtggcgcgc
gggggcggcagcttggaggacctttggggcttcaacgaggaatcggtggtgcgtgccgct
gccgaaagccagatcccgctgatctcagcggtgggccacgaaaccgacacgacgttgatt
gactacgcttccgatcgccgcgcgccaacgccgaccgccgccgccgaaatcgccgtgccg
gtgcgcgccgatctggccttgcgtctgggcgagatgcactcacgcatgggccgcgccgcc
cgtgcccgaatcgagcatcccggccagcgtctgcgcgatctctctcgtgcgcttggccgc
ccgcaaagcctgaccgatcccgcacgccagcgcttcgacctctttgccggaaggctggaa
ccggctttgcggcaattcacccgcacccggcgcgagcggttgaatgcacttggcctaccg
gtggcgctcttgcgcagcttcacccgcagcggcacccaacgcctcgcagctctcacccaa
aagctcgcccccgcgacgaaacgcggcctcacactgcggcaagaacgcatccagcgcctc
ggccaaagcctgaccaacagccgcgcccgcctgctcggcgaagccagccgaggcctcacc
cgcaaccgcgacacattcgaaaagctcaccacccgccttgacgctgccatgacgcgcagc
ttgcagcccagacgcgaaagactcgaccggctcgaccggctccgccaaacgctcggctac
cgcgaaaccctcaagcgcggctttgcggtcgtccacggcccgaagggcctcctcacaagc
gtcgagaccgcccgtcaaacccccgccttcgagatcgaattccacgatggccgtctgcct
gcccaaccggcaagcccgcccgagcccgcacctgccaaaccgcgcaaaaagaaaagcgac
gggcaacaatcgctcttctga
DBGET
integrated database retrieval system
