Profundibacter amoris: BAR1_11870
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Entry
BAR1_11870 CDS
T06831
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pamo
Profundibacter amoris
Pathway
pamo00521
Streptomycin biosynthesis
pamo00523
Polyketide sugar unit biosynthesis
pamo00541
O-Antigen nucleotide sugar biosynthesis
pamo01100
Metabolic pathways
pamo01110
Biosynthesis of secondary metabolites
pamo01250
Biosynthesis of nucleotide sugars
Module
pamo_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pamo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BAR1_11870 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BAR1_11870 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BAR1_11870 (rfbC)
Enzymes [BR:
pamo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BAR1_11870 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AXX98557
UniProt:
A0A347UI79
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All DBs
Position
2374986..2375555
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AA seq
189 aa
AA seq
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MQIEQTALEGVLILTPRRFGDHRGFFSECWNCKVMADHGINYDFVQDNHSLSRQAGTIRG
LHFQAPPHAQAKLVRCGRGALFDVAVDIRRGSPTYGQWVGVELSADNGRQLLIPAGFLHG
FATRLPDTEVIYKCTDYYAPTADGAVRFDDPYIGVEWGIDPKQVVLSDKDAAAPWLRDFE
TPFIYGGAT
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgaacaaaccgcccttgagggggttttaatcctaaccccgcgccggtttggc
gaccatcgcgggtttttctcggaatgctggaactgcaaggtcatggcagaccacggcatc
aactatgatttcgtgcaggacaaccattcgctttcgcgtcaggccggaacgatccgcggt
ttgcattttcaggcgccgccccatgcgcaggccaaactggtgcgctgtggtcggggggcg
ctgtttgacgtggccgtggatatccggcgtggctcgccgacatacggccaatgggtcggg
gtggaattatcggcagacaacggccgccagttgctgatccccgcggggttcctgcacggc
tttgccacccgtctgcccgataccgaggttatttacaaatgcaccgattattatgcccct
accgccgatggcgccgtgcgctttgacgacccctatatcggcgttgagtggggtattgat
ccgaaacaggtcgtgctgtcggacaaggacgccgccgcgccgtggctgcgggattttgaa
acaccgtttatatacgggggtgcaacatga
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