Pandoraea sp. XY-2: DRB87_06270
Help
Entry
DRB87_06270 CDS
T06086
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
pand
Pandoraea sp. XY-2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QBC31043
LinkDB
All DBs
Position
1358059..1364169
Genome browser
AA seq
2036 aa
AA seq
DB search
MLAGPAVAQTSGPLFLDYRGATGGCCHNANGFDGAPGQIDVERTLSGLNILSTHGATGVA
VDVSGGNGGNGDDVSGRDHWGGSGGFGRVVDFVLAQSTVISNGFGASVLSKGGDGGLWGN
RGEGNGNGGNGNFARLTLDGGSVSAVGYGLSAQSIGGNGQTSAIPWGPGVNGGVGGNAGD
ASVVVRGGATVTASASGGSEGAAIRAESLGGQGGLGIDDWEGGYVLSGWGGNAGNVTVST
ADGTVTAHGDGEVGLLARSVGGNGPKRMSDSTDVKGSNGGNAGNITITNGAAISTDGANA
PGIAAYSLGGDGGDGGGGVTGNGFQGGDGGTPGAVTLTNTGSIATRGVGAMGMRVSVVGG
AGGNGGESSPWSGHGGNGGAGGNTGNLAVDIRNDGTIMTSGNDAVGILAHAVGGGAGAAE
LSQGIMNIGGGSGGNGGLGGNTTLSSNGSIFTTGDQSAGVQVQSIGGGGGHGGDADTTGI
IVGIATGGHGGAGGTGGDALMDLGGAISTAGAGSSGVLLQSVGGGGGAGGSSSAMTVGVG
LGVAVSHGGSAGGGGAGGVAHATLDDGSSVTTQAVASDGVVVQSIGGGGGYGGLASSATL
TIAPDLGPEVPSATLSPHVSIGGSGGDGGGGGLAQVDNSGGIWTLGDKSIGILAQSIGGG
GGAGGSAAAALRAQSIATPNRRFNISVGATIGGAGGSGGDGAVALVNNNVDGSVLTAGDH
SYGIVAQSIGGGGGVGGMVQQETAKSFGATLGAPGSVQGLLQSIGNWLTTSGNSMNVAFG
SLTVGVDVRVGGTGGEGGAGNVAAINNHGPVTTSGTGAAAIVAQSIGGGGGQGGTAASTS
VSSLLSSVDSLLGVMAGRIGTYFNVSPNVGTHVAVGGSGGSGGDAWQANVLNTGTLSTAG
FGAPGIVAQSVGGGGGAGAATSQNLELFLSNWAPKDAPGIIDEVTRLIDLLGSNLASAQH
SVNVSVGGQGGSGGSSGTVNVDASDAASRIQTTGDSSPGILAQSISGGGGQAAATDYTFG
ASSLGAAAGSTSPAVSLALGGTYTGNLAGNAGQFSRVNVKSGGVIATQGNDASGVVAQSI
TGGGGATAVGLTGNASTHLAAGQQVAAPVITLGSTLSGELSPSSMNGAPVSVVGSGSIDT
SGVLSHGIFAQSVAGGGGAAGMTVDASVASLLGGAVIKLGASPAGGSSLQANAGSVTVDL
TNPAADQAVVSTRGTLSFGVLAQSIGGGGGYVALVEGGNPSALPVTSLTLGAQGDTFGNG
ADVDVSVARNVAVQTLGQDAHGIVAQSVGGGGGIAGVTTAPGRVTLASVNNVVTRAGANE
GGTVDVVVDGSVQTHGEGAAGVLAQSVGGGGGITGDAAAVSYGLDMVRQANVSGAVGAGG
AVQVNTSGRVVTDGGHAPAILAMSLGGGAVFSDGGVWLKQPGSASGNTGGAIDVTLQPGS
VVAALGADSPAIAAISMGNAGGGSMQGKPIGVTIGSGASVMANATSGIGILAINTDGVTV
ENAGTVSAATAVASLSRASVINSGLMQGNVELTTDSTVENRAGGELRTAQSLSAGLTQNY
GTISPGGAGVFQASKIIGSFSQTGTGVYAPDLDFTNHNSDFLTVTGALTFGGSVVPILRN
PVKNIWLGIGHFDNASTGETAVAKSTALVFNYQMKDHYGGSRDPLISVDANFRPPGVSLN
ANQASFADLLQTHWDAGMVAAGPLFQPFVSAGDAASYRKTLDVLSGAASLMRAGSRGHEN
YDFLNRLMSCPQFVTDGTRMGEGSCVWARVIGTRADRFQTADDVGFRSQQVTYQFGAQRE
FAPDWFVGGSASYVVTHARSSDRSLDISSDGFRGGLTLKRQMGPWQIALAVLGGYESGTQ
NRTIEYPGASARATSRPDAFFVGTRSRLSYQLNYAAGYVKPYTDLDVVYDRNSAYRESGA
GVFDLAMQSEGRTTAVLSPAVEVGARLDYRGTTVRPYLSAGVSFASKGDVSTEASFVQFP
SAAFRITSSQSRVYGNFALGVELLSSKGLEVRAEYNLRTASSQTVQSAALRLAKHF
NT seq
6111 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgggccggccgttgcgcagacgtccggtccgctgtttctcgactatcgcggc
gccacaggcgggtgctgtcacaacgccaacggtttcgacggcgcacccggtcagatcgac
gtcgagcgcacgctctcgggcctgaacattctctcgacgcatggggcgaccggcgtcgcc
gtcgacgtgagcggcggcaacggcggtaacggcgacgatgtcagtggccgcgatcactgg
ggtggcagtggcggctttgggcgcgtcgtcgatttcgtgctcgcgcaaagcaccgtcatc
agcaacggttttggcgcctcggtcctctccaaggggggagacggcggtctgtggggcaat
cgcggcgaaggcaacggtaacggcgggaacggcaatttcgcacgcctgacgctcgatggc
ggctcggtgagcgctgtgggctacggtctgtcggcgcaatcgatcggcgggaacgggcag
accagcgcgattccctgggggcccggcgtgaacggcggggtcgggggaaacgccggggac
gccagcgtggtcgtgcgtggcggggccaccgtcaccgccagcgcgagcggtggaagcgag
ggcgcggccattcgggccgaatcgctgggcggtcaggggggattgggaatcgacgactgg
gagggcggctatgtgctctccggatggggcgggaatgcgggcaatgtcaccgtgtcgacg
gcggacggcaccgtgacggcccatggcgatggcgaagtcggcctgctggcgcgttccgtc
ggcggcaacggcccgaaacgcatgagcgatagcacggacgtcaaaggctcgaacggcggt
aacgccggcaacatcaccatcacgaacggcgcggcgatttccaccgatggggctaacgca
ccgggcattgccgcctacagccttgggggggacggcggcgatggcggcggcggtgtcacc
ggtaacggatttcagggcggcgatggtggaacgccgggggccgtcacgctcaccaacacc
ggcagcatcgcgacgcgcggcgtcggtgcgatggggatgcgggtttcggtcgtcgggggc
gccggcgggaacggtggcgaatccagtccctggtcggggcatggcgggaatggcggtgcg
ggtggcaacaccggaaatctggccgtcgatatcagaaacgacggcacgatcatgacgtcg
ggtaacgacgccgtcggtattctggcgcacgcggtggggggcggcgcgggggcggccgaa
ctgagtcaggggatcatgaacattggcggtgggtccggcggcaacggcggactcggtggc
aacacgacgctcagcagcaacggctcgattttcaccacgggcgatcagagcgccggtgtg
caggtgcagagcatcggtggcggcggggggcacggcggcgacgccgatacgaccggcatc
atcgttggcattgccaccggcgggcacggtggtgccggcggaaccggcggcgatgccctc
atggatctgggcggagcgatctcaaccgctggcgcaggctcgagcggcgttctgctgcaa
agcgtggggggcggtggtggcgctggcgggtcgtccagcgccatgaccgtcggtgttgga
ctgggtgtggccgtcagtcatggcggcagcgccgggggcggtggcgcgggtggcgtggcg
catgccacgctggacgacgggagcagcgtcacgacgcaggccgtcgcaagcgatggcgtc
gtcgtgcaaagcatcggcggtggcggtggctatggcggactcgccagttcggccacgctc
actatcgcaccggatctcggcccggaggtgccttccgccacgctcagtccgcacgtctcc
atcggtggtagcggcggcgacggcggcggcggcgggttggcccaggtcgacaacagcggc
ggtatctggacgctgggtgacaagagcatcggcatactggcccagagcatcggcgggggc
ggcggtgccgggggaagtgctgccgccgcgttacgggcgcaatcgatcgccacgccgaac
cgtcgcttcaacatcagcgtgggcgcgacgatcggcggtgccggtggcagcgggggcgat
ggtgcagtcgcgctggtcaacaataacgtcgacggcagcgtgctcacggctggcgatcac
tcgtatggcatcgtcgcgcaaagcatcggtggcggcggtggcgtgggcggtatggtgcaa
caggaaaccgcgaagtcgttcggcgcaacactcggcgcacccggatcggttcaggggctg
ttgcagtcgatcggcaattggctgacgacctccggcaattcgatgaacgtggcgttcggt
tcactcactgttggtgtggatgttcgcgtcggtggcacgggcggtgagggcggggctggc
aacgtggccgccatcaataaccacggcccggtgacgacatcgggcaccggcgcggcggcg
atcgtcgcgcagagtatcggcggtggcggcggtcagggcggcacggctgcatcgaccagc
gtgtcgagcctgctttcgagcgtcgatagcttgcttggcgtgatggctggcaggattggc
acctacttcaacgtctcacccaatgtcgggacgcatgtggccgttggcggatcgggtggc
tccggcggcgacgcctggcaagcgaatgtactcaacaccggaacgctgtccacggcgggc
ttcggtgcgccgggtatcgtcgcgcagagcgtgggcggcggtggcggagcgggggcggcg
acttcgcagaacctcgagcttttcctctcgaattgggcaccgaaggacgcgccaggcatc
atcgatgaggtcacccgcctcatcgacctgctcggctcgaatctcgccagcgcgcaacac
agcgtcaatgtcagcgttggggggcagggcggcagcgggggaagcagcgggacggtcaat
gtcgacgccagcgatgctgccagtcgcattcaaaccaccggcgacagttcgccgggcatt
cttgcgcaaagcatctccggcggcggagggcaggcggccgcgacggattacaccttcggc
gcgagcagcctcggggccgctgccggatcgacatcgccggcggtgtcgctcgcgcttggg
ggaacatacaccggcaatctggcgggcaatgcgggacagttttctcgcgtgaacgtcaag
agtggtggcgtcatcgcgacccaggggaacgacgcgagcggtgtcgtcgcgcaaagcatc
acgggcggcggcggtgccacagcggtgggcctgacggggaatgcgagcacgcatctcgct
gcagggcagcaggtcgccgccccggtcatcacgttgggcagcacgctgagcggcgaactg
tcgccgtcgagcatgaatggtgcgccggtctcggtcgtgggttcgggcagcatcgataca
agcggcgtgctctcacacggcattttcgcgcagtccgtcgccgggggcggcggcgccgcc
ggcatgaccgtcgacgcgtcggttgcgtccttgctcgggggcgcggtcatcaagcttggt
gcgtcgcctgcgggcggcagcagtctgcaagccaacgccggtagcgtcaccgtcgatctg
acgaaccctgcagccgaccaggcggtcgtgtcgacacgagggacgttgtcgttcggcgtg
ctggcgcaaagtatcggcggtggcggcgggtatgtcgcgctggttgagggcggcaatccg
tcggcgctgccggtcaccagcctgacgctcggggcgcaaggcgacacgttcggcaacggc
gcggacgtcgacgtgagcgtcgcgcgtaacgtcgctgtgcaaacgctgggtcaggacgcg
cacggcatcgttgcccaaagcgtcggcgggggaggcggcattgcaggcgtgaccaccgcg
ccgggacgcgtcacgctagcgtcggtcaacaatgtcgtcacacgcgctggcgccaacgaa
ggcggcacggtggacgtggtcgtcgatggtagcgttcaaacgcatggcgagggggcggca
ggcgtgctggcgcagtccgtgggcggtggaggcggtatcacaggcgatgccgccgcagtg
agctacggtctcgacatggtgcggcaggccaacgtctccggcgccgtgggggcggggggc
gcggtgcaggtgaatacgagcggccgtgtggtcactgacggcgggcacgccccggccatt
cttgcgatgagtcttggcggcggggccgtgttcagcgatggcggcgtatggctgaaacag
cctgggagcgcgagcggcaacacgggcggcgcaatcgacgtgacgcttcaaccgggcagc
gtggttgccgccttaggcgcggactcccccgcgattgcggcgatcagcatgggcaacgcg
ggcggcggttcgatgcagggcaagccgatcggcgtgacgatcggcagcggcgcgagcgtg
atggccaatgcaacttcggggatcggcattctcgccatcaacaccgatggcgtgaccgtc
gagaatgccggtacggtatcggcggcaacggctgtcgcgtcgctgagtcgcgcgagtgtc
atcaacagcggcctgatgcagggcaatgtggaactgacgaccgacagcacggttgagaac
cgcgcgggcggcgagctacgtacggcgcagtcgctctcggccgggctgacgcaaaactac
ggcacgatcagccccgggggggcgggcgtgttccaggcgtcgaaaatcattggcagcttc
tcgcagacgggcaccggcgtctacgcgcccgacctcgatttcacgaatcacaacagcgac
ttcctgacggtgacgggggcattgacgttcggcggcagcgtcgtgccgatccttcgcaat
ccggtcaagaacatctggcttggcatcgggcacttcgacaacgcgtcgaccggtgagacg
gccgtcgcgaagagtacggcgctcgtcttcaactatcagatgaaagatcactatggcggc
tcgcgggatccgctgatttcggtggacgccaacttccggccgccgggcgtgtcgctcaat
gcgaatcaggcgtcgtttgcggacctacttcagacccattgggacgccggcatggtcgcg
gcgggccccttgttccagccgttcgtgagtgcaggcgatgcggcgtcttaccgcaagacg
ctcgacgtgctttccggggcggcgtcactcatgcgcgcaggttcgcgagggcatgagaac
tacgacttcctgaatcgcttgatgagctgcccgcagttcgtcaccgacggcacgcgcatg
ggcgagggcagttgcgtctgggcgcgcgtgatcggcacccgcgccgatcgcttccaaact
gcagatgatgtgggcttccgcagtcagcaggtgacctatcagttcggggctcagagggag
tttgcgcctgactggtttgtcggcggttcggcgagttacgtggtgacgcatgcccgctcg
tcggatcgctcgctggacatatcgagcgatggcttccggggcggactgacgttgaagcgt
cagatggggccgtggcaaatcgcgctcgccgtgctgggcggttacgagagcggcacgcag
aatcgaacgatcgaatatccgggggcgtccgcgcgagccacgagtcggccggacgccttt
tttgtcggcacacgatcccggctgtcctatcaattgaactacgccgcagggtatgtgaag
ccctacaccgatctggacgtcgtctacgacaggaattcggcttaccgtgaaagtggcgcc
ggcgtgttcgatcttgcgatgcaaagcgaggggcgcacaacggcggtgttgagtcccgcc
gtcgaggtgggcgcacgtctcgactatcgtggcacgaccgtgcgcccctatctgtcggca
ggagtgagctttgcgtcgaagggggatgtgagtaccgaggcgtcgttcgtccagttcccg
agcgcggcgtttcgcatcacgtcgtcgcagtcgcgtgtctatggcaactttgcgcttggg
gttgaactgctgtcgtcgaaagggctcgaggttcgggcggaatacaacctgcgcaccgca
tcgtcacagacggtacaaagcgccgcgttgcggctggcgaagcacttctga
DBGET
integrated database retrieval system
