Pandoraea sp. XY-2: DRB87_09635
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Entry
DRB87_09635 CDS
T06086
Name
(GenBank) 23S rRNA pseudouridylate synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pand
Pandoraea sp. XY-2
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pand03009
]
DRB87_09635
Enzymes [BR:
pand01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DRB87_09635
Ribosome biogenesis [BR:
pand03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DRB87_09635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QBC33845
LinkDB
All DBs
Position
2099718..2101514
Genome browser
AA seq
598 aa
AA seq
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MHARDAGAEARAPEGEGGDEKASRRGLRRGPRSLIARRRAAQQSKREGDDGGAGEFAASD
IPRGEPNGDAPQAQALGADGAPLAAQARGRNAAPRKPRSGKRDGAAQSSPPAQSAQGDGS
AASGHGATPTGRAPQGAKGRGRKESTGGARGGAGVGGGKGGKGGKAPKGGDDDLFAFVTS
GGFDSDESEGDAKAAAKRGRRPADRRVLSPDDEAPKLHKVLAEAGMGSRREMEELILAGR
VSVNAEPAHIGQRILPTDQVRINGKLVKRRITSKPPRVLLYHKPSGEIVSHSDPEGRASV
FDRLPPMKTAKWLAVGRLDFNTEGLLILTTSGDLANRFMHPRYGIEREYAVRTVGQLSEA
SRQQLLRGIELDDGKANFLRLQDGGGEGSNHWYHVALTEGRNREVRRMFDAAGLMVSRLI
RTRYGPLTLPRGLKRGRYEELDEAQVRSLFATVGMKMPGTGSDDKGSVGGRGGKAGAPKE
PRRQPDPMQTALGVFSREPGQSRRPRPNPLTAFVGPSGGYPGQSPSPRGEGRRFGGGNSS
AGGGGFGGQSRGGNGGGGNGNVNGNRSRGGNRAGGSGGGNTGGGNQGNRGNRGGNRSR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
ctgcacgcacgcgatgcgggtgccgaagcccgtgcgccggaaggcgagggcggcgacgaa
aaagcatcgcgtcgtggcttgcgccgtggtccgcgcagtctgattgcccgccgtcgtgcg
gctcagcaatccaagcgtgaaggcgacgacggcggcgcaggtgaatttgccgcatcggac
atcccgcgcggggaaccgaacggcgatgcgccgcaagcgcaagcgttgggcgccgacggt
gcgccgttggccgctcaggcgcgaggccgcaatgccgcaccccgtaagccgcgcagcggc
aagcgtgacggtgccgcacagtcctcgccgccggcgcagtcggcgcaaggcgatggcagc
gcagccagcggtcatggtgcgacgccgacaggcagggcgccgcagggtgccaagggccgt
ggtcgcaaggagtcgacgggcggtgcccggggcggcgcaggtgtcggtggcggcaagggc
ggcaaggggggcaaggcgcctaagggcggtgacgacgatctgttcgcgttcgtgacgtcg
ggtggcttcgatagcgacgagtccgaaggcgatgccaaggcggctgccaagcgcggccgc
cgcccggccgaccgtcgcgttctgtcgccggacgatgaggcgcccaagctgcacaaagtg
ctggccgaggccgggatgggatcgcgtcgcgagatggaagagctgattctcgccgggcgc
gtgtcggtcaacgccgagcccgcgcacatcggtcagcgcattctgccgaccgatcaggtc
cgcatcaacggcaagctcgtcaagcgtcgcatcacgagcaaaccgccgcgcgtgctgctc
tatcacaagccgtcgggcgagatcgtcagtcattccgatccggaaggccgcgcgtcggta
ttcgatcgtttgccgccgatgaagacggccaagtggctcgccgttggacgcctggacttc
aacacggaaggcctgctgatcctcacgacgtcgggcgatctggcgaatcggttcatgcat
ccgcgttatggcatcgagcgtgaatatgccgtgcgtaccgtggggcaattgagcgaggcg
tcgcgtcagcaactgctgcgtggcatcgagctggacgatggcaaagccaatttcctgcgg
ttgcaggacggcggtggcgaagggtcgaatcactggtatcacgtagcgttgaccgaaggt
cgcaaccgcgaagtgcgtcgcatgttcgatgcggcgggcctgatggtgagtcgtctgatc
cgtacgcgttacggcccgctgacgctgccgcgcggtctcaagcgcggccgttacgaagag
ctggacgaggcgcaggtgcgctccctgttcgcgacggtcggcatgaagatgccgggcacc
ggctcggacgacaagggcagtgtgggtggtcgtggcggcaaagccggcgcaccgaaagag
ccgcgccgtcaaccggatccgatgcagacggccttgggcgtgttcagtcgcgagccgggc
cagtcgcgccgtccccgtcccaatccgctgacggccttcgttggtccgagcggcggctac
ccggggcagtcgccttcgccgcgaggtgagggacgacgtttcggcggtgggaattcgtcg
gcaggcggcggtggttttggcggtcagtcgcgcggcggtaacggtggtggcggcaacggt
aacgtcaatggcaatcgcagtcgtggcggcaaccgtgctggtggaagtggtggcggcaat
acgggcggtggcaatcaaggcaaccgtggcaatcgcggcggcaaccgttcgcgttga
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