Pandoraea sp. XY-2: DRB87_16455
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Entry
DRB87_16455 CDS
T06086
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
pand
Pandoraea sp. XY-2
Pathway
pand01501
beta-Lactam resistance
pand01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DRB87_16455
01503 Cationic antimicrobial peptide (CAMP) resistance
DRB87_16455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pand02000
]
DRB87_16455
01504 Antimicrobial resistance genes [BR:
pand01504
]
DRB87_16455
Transporters [BR:
pand02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DRB87_16455
Antimicrobial resistance genes [BR:
pand01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DRB87_16455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
DUF3561
Motif
Other DBs
NCBI-ProteinID:
QBC32625
LinkDB
All DBs
Position
complement(3641988..3645167)
Genome browser
AA seq
1059 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIVIMLAGALSILKLPVSQYPPIAPPSVQITAVYPGASAQTVQDT
VTQVIEQQMNGIDNLEYMSSTSDGSGTAQITLTFAQGTNPDIAQVQVQNKLQLATPLLPQ
QVQQQGIKVAKATKNFLLVIGAYSDDGKLTDIDLANYLAANVQDPISRVNGVGQVQLFGA
QYAMRVWVDPQKLNGYNLTILDVSSAIQAQNVQVSAGELGGAPAVKGQQLNATVMAQSRL
QTPEQFRKILLKVNKDGSQVRLGDVARVELGGESYQVVARYNGKPAAGLAVTLATGANAL
QTATAVKQKVADLAQYFPTGMKADFPYDTTPFVKISIEEVIKTLIEGIVLVFLVMYLFLQ
NLRATIIPTIAVPVVLLGTFGIMGAAGFSINTLSMFGLVLAIGLLVDDAIVVVENVERVM
SEEGLSPKEATKKAMSQIVGALVGVALVLSAVFVPMAFFGGSTGAIYRQFSLTIVAAMAL
SVLVAIVLTPAMCATILKPIKKGEVHEKRGFFGWFNRTFDNSSKKYQSQVERILKRSTPF
LIVYVVIVAVVGFLFVRMPTAFLPDEDQGYFFNLVQLPPGATQERTLDVMKQVEKHYLEN
EKDAVRSIFTVTGFGFNGRGQNVGLAFTMMKPWDERQSADLKVQSVIARAYRAFAGMKDA
MVFAINPPSVPELGNAGGIDFELQDRAGLGHDALMAARNQLLGMAAKNPNLANMRPNGLD
DTPQYKVDVDEEKAAALGLSIADVYNTLSASWGSSYVNDFIDRGRVKKVYVMAEAKDRML
PQDINKLYVRNSSGAMVPFSAFATGQWIYGSPRLERYNGVPAVEIQGMPAPGKSSGDAMK
AIEEIAKQLPTGIGLEWTGLSFEERISGSQAPALYAISILIVFLCLAALYESWSIPFSVI
LVVPLGVLGALLAATLRGLSNDVYFQVGLLTTVGLSAKNAILIVEFAKDLQEQGRTLMEA
TMEAVRLRLRPILMTSMAFVLGVLPLAISNGAGSASQHAIGTGVIGGMLAATFLAIYYVP
VFFVLVRKRFAHEDLDTVEHPEARKPNPDATEGPAKEGN
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttttttatcgatcgcccgatctttgcttgggtgatcgcgatcgtcatcatg
ctggccggtgcgctttcgatcctgaagctgccggtttcgcagtacccgccgatcgccccg
ccgtccgttcagatcactgccgtttatccgggcgcttccgcacagaccgtgcaggatacg
gtcacgcaggtgatcgagcagcagatgaacggtatcgacaacctcgagtacatgtcgtcg
acgtccgacggctcgggtaccgctcagatcacgctgaccttcgcgcaaggcacgaatccg
gatatcgcgcaggtgcaggtgcagaacaagctgcagctcgccacgccgctgcttccgcag
caggtgcagcagcaggggatcaaggtcgccaaggcgaccaagaacttcctgttggtgatc
ggcgcctattccgacgacggcaaactgaccgacatcgacctcgcgaactatctggccgcc
aacgtacaggatccgatcagccgtgtgaacggcgtcggtcaggtccagctcttcggtgcg
cagtacgccatgcgtgtgtgggtcgatccgcagaagctcaacggctacaacctgacgatc
ctcgacgtctcgagcgccatccaggcgcagaacgtgcaggtttcggcgggcgagctgggc
ggcgcaccggcggtgaaggggcagcagctcaacgccacggtgatggcgcagagccgcctg
cagacgccggagcagttccgcaagatcctgctcaaggtcaacaaggacggctcgcaagtg
cgtctgggcgatgtcgcccgcgtggagctgggcggtgaatcgtaccaggtggtcgctcgc
tataacggcaagccggcggcgggtctcgcggtcacgctggccacgggcgccaacgcgctg
caaacggccacggccgtcaagcagaaggtggcggacctcgcacagtacttcccgacgggc
atgaaagccgacttcccgtacgacaccacgccgttcgtgaagatctcgatcgaggaagtg
atcaagaccctcatcgaagggatcgtgctcgtgttcctcgtgatgtatctgttcctgcag
aacctgcgggcgacgatcattccgacgattgccgtgccggtggtgttgctcggtactttc
ggcatcatgggcgcggcgggtttctccatcaacacgctgtcgatgttcgggctggtgctc
gccatcggtttgttggtggacgatgcgatcgtggtggtggagaacgtcgagcgggtgatg
tccgaagaggggctgagtccgaaggaagcgacgaaaaaggccatgagccagatcgtcggt
gcgctggtgggggtggcgctcgtgctctccgcggtgttcgtgccgatggcattcttcggc
ggctcgaccggcgccatctatcgccagttctcgctgaccatcgtggcggccatggcgctg
tcggtgctcgtggccatcgtgctcacgccggcgatgtgcgccacgattctcaagcctatc
aagaagggcgaagtgcatgagaagcgcggcttcttcggctggttcaaccgcacgttcgac
aacagttcgaaaaagtaccagagccaggtggagcgcattctcaagcgcagcacgccgttc
ctgatcgtctatgtggtgatcgtggccgtcgtgggcttcctgttcgtgcgcatgccgacc
gcgttcttgcccgacgaagaccagggctacttcttcaacctcgtgcaattgccgccgggc
gcgacgcaggagcgtacgctcgacgtgatgaagcaggtcgagaagcactatctggagaat
gaaaaggacgccgtgcgttcgatcttcacggtgacgggcttcggcttcaacggccgtggt
caaaacgtgggtctcgcgttcacgatgatgaagccgtgggatgagcgtcagtcggccgat
ctcaaggtgcagtcggtgatcgcacgggcgtaccgggcgttcgccggcatgaaggacgca
atggtcttcgcgatcaacccgccgtcggtgccggagctcggtaacgcaggcggtatcgac
ttcgagttacaggatcgcgcgggtctcggccacgacgcgctcatggccgcccgtaaccag
ttgctgggcatggcggcgaaaaacccgaaccttgcgaacatgcgtccgaacggactcgac
gatacgccgcagtacaaggtggacgtcgacgaagaaaaggccgcggcgctggggctgtcg
attgccgacgtgtacaacacgctctcggcgtcgtggggctcgtcgtacgtgaacgacttt
atcgatcgcggtcgtgtgaagaaggtgtacgtgatggcagaagcgaaggatcgcatgctg
ccgcaggacatcaacaagctttacgtccgtaattcgagcggggccatggtgccgttctcg
gcctttgccacagggcagtggatttacggctcgccgcgtctggagcgctacaacggggtg
cctgccgtggaaattcagggcatgccggcaccgggcaagtcgtcgggcgacgccatgaag
gcgatcgaggaaattgcgaagcaactcccgacgggtatcggtctggagtggacggggctg
tcgttcgaagagcgcatctctggctcgcaggcgccggcgctctacgccatctccatcctg
atcgtgttcctgtgtctggcggcgttgtacgagagctggtcgattccgttttcggtgatt
ctggtggtgccgttgggggtgttgggggcactgctcgccgcgaccctgcgcgggttgtcc
aacgacgtatacttccaggtgggtctgctgaccacggtggggctgtcggcaaagaacgcg
attctgatcgtggaattcgccaaggacctccaggagcagggccgcaccctgatggaagcg
acgatggaggcggtgcgtctgcgtctgcgcccgattctgatgacgtcaatggcgttcgtg
ctcggcgtgttgccgctggcgatctccaacggcgcgggctcggcttcgcagcatgcgatc
gggacgggcgtgatcggcggtatgctggcggcgacgttcctggcgatctactacgtgccg
gtgttcttcgtgctggtgcgcaagcgcttcgcgcatgaagacctggacaccgtggagcat
ccggaagcgcgcaagccgaacccggacgccaccgaaggccccgccaaggaaggaaactga
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