Polynucleobacter antarcticus: DCO16_01590
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Entry
DCO16_01590 CDS
T08332
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani00521
Streptomycin biosynthesis
pani00523
Polyketide sugar unit biosynthesis
pani00541
O-Antigen nucleotide sugar biosynthesis
pani01100
Metabolic pathways
pani01110
Biosynthesis of secondary metabolites
pani01250
Biosynthesis of nucleotide sugars
Module
pani_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DCO16_01590 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DCO16_01590 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DCO16_01590 (rfbC)
Enzymes [BR:
pani01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DCO16_01590 (rfbC)
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QKM61888
UniProt:
A0A6M9PQX8
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All DBs
Position
282058..282630
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AA seq
190 aa
AA seq
DB search
MTENSNAKLQVTPTAIPDVLIIEPKVFGDNRGWFTESFNANEFAKATGLDITFVQDNHSF
SRQWTLRGMHYQLEHTQGKLVRVTSGSVFDVAVDLRKDSATFGKWVGVELSVENHRQMWV
PPGFAHGFLVLSETAEFLYKTTDYYDPSSEACLSWCDPTVGIEWPIPLDKQALLNGKDAA
GLAWDAAPKF
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaattcaaatgctaagttacaagtaacaccaacggctattccggatgtctta
atcatcgagcctaaggtatttggtgacaatcgcggttggtttacggaatcctttaatgcc
aatgaatttgcaaaagcaaccgggcttgatataacgtttgtgcaagacaatcattctttt
tcaaggcagtggacgcttcgggggatgcattatcagcttgagcatacccaaggaaaatta
gtcagagtcacatcaggtagtgtctttgatgtagctgttgatttaagaaaagactctgcc
acttttggtaaatgggttggcgtagaactctctgttgaaaaccacaggcagatgtgggta
cccccgggctttgctcatggctttttggttctttcagaaactgctgagtttctgtataaa
actaccgattattatgatcccagtagcgaagcctgtttatcgtggtgcgaccctactgtt
gggattgagtggcccatccccctagataaacaggccttgcttaatggcaaagatgctgct
ggcctggcatgggatgccgcgccaaagttttga
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