Pantoea anthophila: OJ965_15380
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Entry
OJ965_15380 CDS
T08866
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pano
Pantoea anthophila
Pathway
pano03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OJ965_15380 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pano03400
]
OJ965_15380 (uvrB)
DNA repair and recombination proteins [BR:
pano03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OJ965_15380 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OJ965_15380 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
SBDS_domain_II
DUF87
AAA_30
AAA_22
HEM4
Motif
Other DBs
NCBI-ProteinID:
UZH02082
LinkDB
All DBs
Position
complement(2764271..2766292)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKAFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMIIDQRSILRRLSELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIESVVPR
FTIYPKTHYVTPRERILQAMEEIKVELADRRRVLLENNKLLEEQRITQRTQFDLEMMSEL
GYCSGIENYSRYLSARGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYKGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGKYELEKSGNEVVDQVVRPTGLLD
PIIEVRPVGTQVDDLLSEIRQRVAANERILVTVLTKRMAEDLTEYLTEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMARAIEETERRREKQQLHNEKNGIVPQGLNKKITDILELG
NNVVKTRGKARPARPGEAQAQADLLTLTPQALQKKIHELEGQMQQHAQNLEFEQAANVRD
QLHELRTLFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcctttaaattaaactctgcctttaaaccttcaggcgatcagcctgaggcg
atccgtcgcctggaagagggactggaggatggactggcccatcagaccttattaggggta
accggctccggtaaaacctttaccgtcgccaacgtgattgccgacctcaaccgtccgacc
atggtgctggcgcccaataagacgctggccgcccagctttatggcgaaatgaaagagttt
ttcccggataacgccgtggagttcttcgtctcttactacgactactatcagcctgaagcc
tatgtgcccagctccgacacctttatcgaaaaagatgcctcggtgaatgagcacatcgaa
caaatgcgtctgtcggccaccaaggcgctgctggagcggcgggatgtgatcgtggtggcg
tccgtctccgcgatctacggtctgggcgaccccgatctctatctgaaaatgatgctgcac
ctgacccgcggcatgatcatcgatcagcgcagtattctgcgtcgtctctcagaattgcaa
tacacccgaaacgaccaggcgttccagcgcgggaccttccgggtgcgcggcgaagtgatc
gatatcttcccggcggagtcggatgacattgcgctgcgcgtagagctgtttgacgaagag
gttgagcggctgtcgctgttcgacccgctgaccggccagatcgagtcggtggtgccgcgc
ttcaccatctaccctaaaacccactacgtcacgccgcgcgagcgtatcctgcaggcgatg
gaagagatcaaagtggagctggcggatcgccggcgggtgctgctggagaacaacaaactg
ctggaagagcagcgtatcacccagcgtacccagtttgatctggagatgatgagcgagctg
ggctactgctccggcatcgaaaactattcacgctatctctctgcccgcgggccgggcgaa
gcgccgccaacgctgtttgactatctgcctgccgatggcctgctggtggtggatgagtcc
cacgtcaccattccgcagattggcggcatgtacaaaggcgaccgggcgcgtaaagagacg
ctggtggagtatggcttccgtctgccgtcggcgctggataaccgtccgatgaagtttgaa
gagtttgaggcgctggcgccccagaccatctacgtgtcggcgacgccgggtaaatatgag
ctggaaaaatcgggcaatgaagtggtcgatcaggtggtgcgtccgaccggtctgctcgat
ccgatcatcgaagtgcgtccggtcggcacccaggttgacgatctgctgtcggagatccgt
cagcgcgtggcggccaacgaacgtatcctggtgacggtgctgaccaaacgcatggcggaa
gatctcaccgaatacctgacagagcatggcgaaaaggtgcgctatctgcactccgatatc
gatacggtggaacgtatggagatcatccgcgacctgcgtctgggtgagtttgatgtgctg
gtgggcatcaacttactgcgtgaggggctggatatgccggaagtgtcactggtcgcgatc
ctggatgcggataaagagggcttcctgcgttcagaacgttccctgatccagaccatcggt
cgtgcggcacgaaacgtcaacggtaaggcgattctctacggcgataaaatcacgccgtcg
atggcgcgcgccattgaagagaccgaacgccgccgtgagaaacagcagctgcacaatgaa
aagaatggcatcgtgccgcagggcctcaacaagaagatcaccgatattctggaactcggc
aacaacgtggtgaaaacccgtggcaaagccagaccggcccgcccgggcgaagcgcaggct
caggccgatttgctgaccttaacgcctcaggcgctgcagaagaaaatccacgagctggag
ggacagatgcagcagcatgcgcagaacctggagttcgagcaggcggcgaacgtgcgcgat
cagctgcatgagctgcgtacgctgtttattgcggcctcatag
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integrated database retrieval system
