Pantoea anthophila: OJ965_19905
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Entry
OJ965_19905 CDS
T08866
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pano
Pantoea anthophila
Pathway
pano00071
Fatty acid degradation
pano00280
Valine, leucine and isoleucine degradation
pano00310
Lysine degradation
pano00362
Benzoate degradation
pano00380
Tryptophan metabolism
pano00410
beta-Alanine metabolism
pano00640
Propanoate metabolism
pano00650
Butanoate metabolism
pano00907
Pinene, camphor and geraniol degradation
pano00930
Caprolactam degradation
pano01100
Metabolic pathways
pano01110
Biosynthesis of secondary metabolites
pano01120
Microbial metabolism in diverse environments
pano01200
Carbon metabolism
pano01212
Fatty acid metabolism
Module
pano_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
OJ965_19905 (fadB)
00650 Butanoate metabolism
OJ965_19905 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
OJ965_19905 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
OJ965_19905 (fadB)
00310 Lysine degradation
OJ965_19905 (fadB)
00380 Tryptophan metabolism
OJ965_19905 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
OJ965_19905 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
OJ965_19905 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OJ965_19905 (fadB)
00930 Caprolactam degradation
OJ965_19905 (fadB)
Enzymes [BR:
pano01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
OJ965_19905 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
OJ965_19905 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
OJ965_19905 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
OJ965_19905 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
SAM_MT
Motif
Other DBs
NCBI-ProteinID:
UZH02896
LinkDB
All DBs
Position
3737128..3739311
Genome browser
AA seq
727 aa
AA seq
DB search
MLYQGANLTLHWLDDGIAELVFDATGSVNKLDTQTVASLGEAIAVLEQQPALRGLLLSSA
KPAFIVGADITEFLSLFDAPTEKLSQWLSYANSIFNRLEDLPVPTLAAIDGYALGGGCEC
VLATDMRIATADARIGLPETRLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVDGNAALK
LGLVDAVVARDKLREAGITMLRAAAEEGSWQARRAPKLAPLKLSPIEAAMSFTIAKGMVI
QTAGKHYPAPLMAVKTIEAAASLGRDDALKLETAAFVPLAQSDEARALVGIFLNDQYVKG
LAKKRASESGAPAQAAVLGAGIMGGGISYQSAWKGVPVRMKDINPQALTLGMNEASKLLN
TQLARGKIDGNRLASVIATIQPTLDYAGFEQADVVVEAVVENPQIKAKVLAETERHLRDD
AVLASNTSTIPISQLAQALQRPENFCGMHFFNPVPRMPLVEVIRGEKTSEATLGKVVAWA
SKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRQIDKVMEKQFGWPMGPSWLL
DVVGIDTAHHAQSVMADGFPDRMKHDYRDAIDLLFEAGRFGQKNGKGFWRWEEDKKGKPK
KVADADVDTLLQQACQPARIFSDEEILNRMMLPMLNEVVRCLEEKIIASPAEADMALVYG
LGFPPFRGGAFRYLDTLGNSNVVDQARRYSGLGGLYALPALLLQKAHQHESWYLAAKPID
EAALKSA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgctaaccttacccttcactggctggacgatggcatcgccgagctg
gtttttgatgccacaggctcagtcaacaagctggatacgcaaacggtcgccagtctgggc
gaggccattgcggtcctggaacagcagccagcactgcgcggcctgctgctgagctccgct
aaacccgcctttatcgtgggtgcggacattaccgagttcctttccctgtttgatgctccc
accgaaaagctgagccagtggctgagttacgccaacagcatcttcaaccgtctggaagat
ttgcccgtgcccaccctggcagccattgatggttatgcgctgggtggcggatgtgagtgc
gtcctggcgaccgacatgcgcatcgccactgcggatgcccgcatcggcctgccggaaacc
agactcggcatcatgccaggctttggcggcagcgtaaggttgccccgcctgctgggagcc
gacagcgcgctggaaattattgccgccggtaaagatgtggatggcaatgccgcgctgaaa
ctgggcctggtcgatgcggtggttgcccgtgacaaactgcgcgaagcgggcatcaccatg
ctcagagcggccgccgaagagggcagctggcaggcgcgccgtgcgcctaaactggccccg
ctgaagctcagtccgatcgaggcggcgatgagttttaccattgcgaagggcatggtgatt
cagaccgcaggaaagcattaccccgctccgctgatggcggtaaaaaccattgaggccgcg
gccagtctcggtcgtgatgatgcgctgaagcttgaaacggctgcatttgtgccgctggcg
cagtctgacgaagcgcgcgcactggtcggcatcttcctcaacgatcagtacgttaaaggg
ctggcaaaaaaacgcgccagcgaaagcggcgcacctgctcaggcggccgtgctgggcgca
ggcatcatgggcggtggcatcagctaccagtctgcctggaaaggcgtgccggtcagaatg
aaagatatcaatccacaggcgctgacgctggggatgaatgaagccagcaagctgctcaac
acccagctggcgcgcggaaaaattgacggcaacagactggccagcgtcatcgccaccatc
cagcccacgctggattacgccggttttgaacaggccgacgtggtggtggaagcggtggtc
gagaatccgcagatcaaggctaaagtgctggctgaaacagagcggcacctgcgtgacgat
gccgttctggcctcgaatacttcgaccattcctatcagccagctggcgcaggcgttacag
cgcccggaaaacttctgtggcatgcacttctttaacccggtgccgcgtatgccgctggtc
gaagtgatccggggcgagaaaaccagtgaagcgaccctcggcaaagtggtggcctgggcc
agcaaaatgggcaaaacccctatcgtggtcaacgactgccccggcttctttgttaaccgg
gtgctgttcccctacttcgccgctttcagcctgctcctgcgcgatggcgcagatttccgc
cagatagataaggtcatggaaaaacagtttggctggccgatggggccgtcatggctgctg
gatgtcgtgggcatcgatacggcgcaccacgcgcaaagcgtgatggctgacgggttcccg
gaccgcatgaagcatgactatcgcgacgcgatcgatctgctgtttgaggctggtcgcttt
ggccagaaaaatggcaaaggcttctggcgctgggaagaagataaaaagggcaagccaaaa
aaagtggccgatgccgatgtcgatacgctgctgcagcaggcctgtcagcccgcgcgaatc
ttcagcgatgaagagattctgaaccgcatgatgctgccgatgctgaacgaagtggtgcgc
tgcctggaagagaagattatcgcctcaccggcggaagccgatatggcgctggtgtatggc
ctcggcttcccgcctttccgtggcggggctttccgctatctcgatactctgggtaacagc
aacgtggtggatcaggcccggcgttatagcggcctcggtggcctgtatgccctgcctgcc
ctgctgctgcagaaagcccatcagcatgaaagctggtatctcgccgccaaaccgattgat
gaagccgcgctgaaaagcgcctga
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