Pantoea sp. PSNIH2: PSNIH2_04585
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Entry
PSNIH2_04585 CDS
T03514
Name
(GenBank) hypothetical protein
KO
K19789
DNA repair protein RadD
Organism
panp
Pantoea sp. PSNIH2
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panp03400
]
PSNIH2_04585
DNA repair and recombination proteins [BR:
panp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PSNIH2_04585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
zinc_ribbon_2
DZR
AAA_16
AAA_22
zf-tcix
SLFN-g3_helicase
UPF0547
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
AIX73118
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Position
complement(1000769..1002523)
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AA seq
584 aa
AA seq
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MSFTLRPYQQEAVAATLNHFRRSQQPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE
LVAQNHGKYCALGLEADIFAAGLARKESQSKVVFGSVQSVARNLAQFDSAFSLLIVDECH
RIGDDENSQYQQILTHLRLHNPQLRLLGLTATPYRLGKGWIYRFHYHGMVRGDERALFHD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLNAQANGLFSEADLNRELKQQQRITPH
IISQIVEFAADRKGVMIFAATVEHAKEVLALLPDGKALVSAETPGPERDALIDAFKRQQI
KYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSEGKTDCLILDYAGNPH
DLFTPEVGAPKGKSDNEPVQVFCPACGFANTFWGKTTADGMIIEHFGRRCQGVLEDDDGN
REQCDYRFRFKSCPHCNAENDIAARRCHECDAVLVDPDDMLKAALKLKDALVLRCGGMTL
EAGRDDKGEWLKATYYDEDGTSVSERFRLQTPAQRTAFEQLFMRPHQRAPGVPLGWQTAN
DVVALQPLLRHPDFVVARARGQFWQVREKVFDYQGRYRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttaccctgcgtccttatcaacaggaagcggttgccgccacgctcaaccacttc
cgccgttcccaacagcctgcggttatcgtgctgcctaccggcgccggtaaaagcctggtt
atcgccgagctggcgcgcgtggcgcgaggccgcgtgctggtgctggctcacgttaaagag
ctggtggcgcaaaaccacggcaaatattgcgcgctggggctggaggcggatattttcgcc
gccggcctggcgcgtaaagagagccagagcaaggtggtgttcggcagcgtgcagtcggtg
gcgcgcaacctggcgcagtttgacagcgccttttcgctgctgatcgtcgatgagtgccac
cgcatcggcgatgatgagaacagccagtatcagcagatactgacgcatctgcgcctgcat
aatcctcagctgcggctgctgggcctgaccgcgacgccctaccgtctcggcaaaggctgg
atctatcgtttccactatcacggcatggtgcgcggcgacgagcgcgcgctgtttcacgac
tgcatctatgagctgccgctgcgctatatgatcaagcatggctttctggtgccgccggaa
cgtcttgatatgccggtggtgcagtatgatttcagccgcctgaacgcgcaggcgaacggc
ctgttttccgaagccgacctcaaccgcgagctgaagcagcagcagcgtatcacgccgcac
attatcagccagatcgtcgagttcgccgccgatcgcaaaggggtaatgattttcgccgct
accgtagagcacgccaaagaggtgctggcgctgctgccggacggtaaggcgctggtcagc
gctgagacacccggcccggagcgcgatgcgctgatcgacgcttttaagcggcagcagatc
aaatatctggttaacgtggcggtactgaccaccggcttcgacgcaccgcatgtcgatctg
atcgccattctgcgccctaccgagtcggtcagcctttatcaacagattgtcggccgcggg
ctgcgtctcagcgagggcaaaaccgactgtctgatcctcgactacgccggcaacccgcac
gatctgtttacgccggaggtgggcgcgccgaaaggcaagagcgacaacgaaccggtgcag
gttttctgtccggcctgcggcttcgccaacactttctggggcaaaaccaccgccgacggc
atgattatcgaacactttggccgccgctgtcagggcgtgctggaggatgacgacggcaac
cgcgagcagtgcgactatcgcttccgctttaaaagctgcccgcactgcaacgctgaaaac
gatatcgccgcgcgccgctgccatgagtgcgacgcggtgctggtcgatcctgatgatatg
ctgaaggcggcgctgaagctaaaggacgcgctggtgctgcgctgcggcggcatgacgctg
gaggcgggccgcgacgacaaaggcgagtggctgaaggcgacctattacgatgaggacggc
accagcgtcagcgagcgctttcgtctacagacgccggcgcagcgcaccgcgtttgaacag
ctgtttatgcggccgcatcagcgcgcgcccggcgttccgctcggctggcagaccgccaac
gacgtggtggcgttgcagccgctgctgcgtcatcccgattttgtagtggcgcgcgcccgc
ggccagttctggcaggtgcgcgaaaaggtgttcgactatcagggacgctatcgccgcgcc
aacgagctgcgttga
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