Pseudomonas antarctica: A7J50_5358
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Entry
A7J50_5358 CDS
T04830
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
panr
Pseudomonas antarctica
Pathway
panr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A7J50_5358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
panr03021
]
A7J50_5358
Transcription machinery [BR:
panr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A7J50_5358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_24
Sigma70_r2
Rv2175c_wHTH
Sigma70_ECF
HTH_Tnp_ISL3
Sigma70_r3
HTH_29
HTH_28
HTH_17
HTH_31
PF0610-like_N
CENP-B_N
HTH_38
MerR
Motif
Other DBs
NCBI-ProteinID:
ANF88692
UniProt:
A0A172Z8I4
LinkDB
All DBs
Position
5894234..5894623
Genome browser
AA seq
129 aa
AA seq
DB search
MRLLGRDELREPREPRAFLVSIAKGLLFDYFRRAALEQAYLNELMLLPESEQPSPEEQQL
ILEDLKAIDQLLAKMSSKARAAFLYNRLDGMSHAEIARRLDVSVPRVRQYLAQGIRQCYV
ALYGEPSCP
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctgggccgtgatgagttgcgcgaaccgcgcgagccacgggcgtttctggtg
tcgatcgccaaaggcctgctgttcgactacttccgccgcgcagcactggaacaggcttac
ctcaacgaactgatgctgctcccggaaagcgaacagccgtcgcccgaagaacagcaattg
atcctcgaagacctcaaggccatcgaccaactgctcgccaagatgtcgagcaaggcccgc
gccgccttcctctataaccgcctcgacggcatgagccacgcagaaatcgcccggcgtctc
gacgtgtcggtgccccgcgtgcgtcagtacctggcccagggcattcgccagtgctacgtc
gcgctgtatggcgagccgtcgtgcccgtga
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