Pantoea sp. At-9b: Pat9b_2669
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Entry
Pat9b_2669 CDS
T01386
Name
(GenBank) type III restriction protein res subunit
KO
K19789
DNA repair protein RadD
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_2669
DNA repair and recombination proteins [BR:
pao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Pat9b_2669
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
zf-tcix
SLFN-g3_helicase
AAA_22
zinc_ribbon_2
AAA_16
DZR
Motif
Other DBs
NCBI-ProteinID:
ADU69969
UniProt:
E6WG45
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Position
2927878..2929668
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AA seq
596 aa
AA seq
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MRVRFRKKFLPMSFTLRPYQQEAVNATIAHFRQHASPAVIVLPTGAGKSLVIAELARLAR
GRVLVLAHVKELVEQNHSKYQAWGLDADIFAAGLQRKQSERKVVFGSIQSVARNLDRFDS
AFSLVIVDECHRISDQSESQYQQLFTHLRQHNPQLRLLGLTATPFRLGKGWIYQFHYHGM
VGGDENALFRDCIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLIPQNNGLFSEADLNR
ELQQQQQRVTPHIIQQIVEFAEDRRGVMIFAATVEHAREVLSLLPENSALVSAETAVKER
DRLINAFKAQQLKFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKT
DCLILDYAGNPHDLFTPEVGAPKGASDNQPVQVFCPACGFANTFWGKATADGHVIEHFGR
RCQGVLEDDDGLREQCDYRFRFKSCPDCGVENDIAARRCQQCDKVLVDPDDMLKAALKLK
DARVLRCGGMTLTQGRDEKGEWLKATYYDEDGLDVSERFRLHTPAQRKAFEQLFMRPHQR
APGVPLGWQTAADVVALQPLLRHPDFVVARAKGHFWQVREKVFDYQGRFRRANELR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtccgtttcagaaaaaagtttttgccgatgtctttcaccctacgcccctatcaa
caagaggcggtaaacgcgaccatcgcccatttccgccagcatgcctcgcctgccgtcatc
gtgctgcccaccggggcaggtaaaagtctggtcatcgccgaactggcccggctggcgcgt
ggacgcgtgttggtactggcgcatgtgaaagaactggtggagcagaaccacagcaaatat
caggcctggggtctggacgcggatatctttgccgccggtctgcaacgcaaacagagcgaa
cgcaaagtggtgtttggcagcatacagtcggtggcgcgtaatcttgaccgtttcgatagc
gccttttcgctggtgattgtcgatgagtgtcatcgcatcagcgaccagagcgaaagccag
tatcagcaactcttcacccatctgcgtcagcataatccacagctccgcctgctgggattg
acggcgacgcccttccgcctgggtaagggttggatctatcagtttcattatcacggcatg
gtaggcggtgacgaaaacgcgttgtttcgtgactgcatctacgaattgccgctgcgctat
atgatcaagcacggcttcctggtgccgccggagcgattagatatgccggtggtgcaatat
gatttcagtcgcctgatcccgcaaaacaatggcctgtttagcgaagccgatctgaatcgc
gagttgcaacaacaacaacaacgcgtcacgccgcacatcatccagcagatcgtggaattt
gccgaagatcgacgtggggtgatgatttttgccgctaccgtcgagcatgcacgggaagtg
ctgtcgttactgccggagaacagtgcgctggtctcggcagaaaccgccgtgaaagagcgt
gaccggctgattaacgctttcaaggcacagcaactgaaatttctggtcaatgttgcggtg
ctgaccaccggattcgatgccccccatgtcgatctgatcgccatcctgcgtccgaccgaa
tccgtcagcctgtatcaacagattgtcgggcgcggcctgcggcttgcccccggcaaaacc
gattgcctgatcctcgattacgctggcaacccgcatgatctttttacgccagaagtcggt
gcgcctaaaggtgccagtgacaatcaacccgtgcaggtgttttgtccggcctgcggcttc
gccaacaccttctggggcaaagccaccgccgatggccatgtgattgagcattttggtcgc
cgctgtcagggggtactggaagatgatgacggcctgcgcgaacaatgtgattaccgcttc
cgctttaaaagctgcccggattgtggcgtagaaaacgatattgctgcgcgtcgctgccag
caatgtgacaaggtgctggtcgatcccgacgatatgctgaaagcggcgctgaagctgaaa
gatgcccgggtattacgctgtggcggtatgacactgacgcaaggacgagacgagaaaggc
gaatggttaaaggccacctactacgatgaagatgggctggacgtaagtgagcgcttccgt
ctgcatacgcccgcacagcgcaaagcctttgagcagctgtttatgcgcccgcaccaacgc
gcgcctggcgtgccattgggatggcagaccgccgctgatgtcgtggcgttacaacccttg
ttacgtcaccctgattttgttgtggcgcgtgccaaaggccatttctggcaggtgcgtgaa
aaggtgtttgattatcagggccgttttcggcgcgccaacgagctgcgataa
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