Pantoea sp. At-9b: Pat9b_3070
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Entry
Pat9b_3070 CDS
T01386
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pao
Pantoea sp. At-9b
Pathway
pao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Pat9b_3070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_3070
DNA repair and recombination proteins [BR:
pao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Pat9b_3070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
ADU70369
UniProt:
E6WG89
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Position
3366685..3369228
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AA seq
847 aa
AA seq
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MDFSAHTPMMQQYLRLKADHPDILLFYRMGDFYELFYDDAKRASQLLEISLTKRGASAGE
PIPMAGVPYHAVEGYLAKLVQLGESVAICEQIGDPALSKGPVERKVVRIVTPGTISDEAL
LQERQDNLLAAIFQSQRGFGYATLDISSGRFRLSEPGDQETMAAELQRTNPAELLYPEDL
QAMALIDQRRGLRRRPLWEYEIDTARQQLNLQFGTRDLNGFGVEQAHLALRAAGCLLQYV
KDTQRTSLPHIRSLSMERQQDSVIMDAATRRNLEITQNLAGGTDNTLAAVLDKTVTPMGS
RMLKRWLHMPLRDVDTIARRQEAIAELQAHSEELQPVLRQIGDLERILARLALRTARPRD
LARMRHAFQQLPELNALLQAVNAPQLTQLRSQMGEFSELRELLENAIIESPPVLVRDGGV
IAPGYNAELDEWRALADGASDYLDRLEIREREKLGLDTLKVGFNAIHGYYIQVSRGQSHL
VPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKGLYDELFDRLLPHLEALQL
SAAALAELDVLSNLAERAWTLNYCRPVLQEKAGIRITGGRHPVVEQVLKEPFIANPLSLS
TQRRMLIITGPNMGGKSTYMRQAALIALMAWIGSFVPAEETVIGPIDRIFTRVGAADDLA
SGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAESLANRIKAMTL
FATHYFELTTLPEKMEGVVNVHLDAVEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKE
VIKRARHKLKELETLSGSTAASTVEGSQLPLLVAETSPAVEALEALDPDTLTPRQALEWI
YRLKTLV
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggacttcagcgcccatacgcccatgatgcagcaatacctgcgtctgaaggccgatcat
cctgacattctgctgttctatcgcatgggcgatttttacgagctgttttatgatgacgcc
aaacgcgcctcgcagctgctggaaatctctctcaccaaacgtggtgcgtcagcaggcgaa
cccattccgatggcgggcgtcccttatcacgcggttgaaggttatctggcgaaactggtc
cagttaggggaatcggtcgcgatttgcgagcaaattggcgacccggcgctgagtaaagga
ccggtcgagcgtaaagtcgtgcgcattgtcacccctggcaccatcagcgatgaagcgttg
ctacaggagcggcaggacaacctgctggccgccatttttcaaagccagcgtggctttggc
tatgccacgctggatatcagctcaggacgttttcgcctgagcgagccgggtgatcaggaa
accatggctgccgagttgcagcgtactaacccggccgaattactctatcccgaagatttg
caggcgatggcgctaatcgaccaacggcgcggcctgcgtcgtcgcccgctttgggaatat
gaaatcgataccgcgcgtcagcagttaaatctgcaatttggcacgcgtgacctcaacggt
tttggcgttgaacaggcgcatctggcgctgcgcgcggcgggttgtctgctgcaatatgtc
aaagacacccaacgcacctcgctgccccatatccgctcactcagtatggagcgccagcag
gatagcgtgatcatggatgccgctacgcgtcgcaatctggaaatcacgcaaaacctcgcc
ggtggcaccgacaataccctggccgccgtactggataaaaccgtcacgccaatgggcagc
cgcatgctgaaacgctggttgcatatgccgttgcgtgatgttgacaccatcgcccgccgt
caggaagccattgcggaattacaggcgcacagcgaagaactgcaaccggttttacgccag
atcggcgacctggagcgtatcctcgcccgtctggcattacgtaccgcccgcccgcgtgac
ctggcgcgtatgcgtcacgccttccagcaactgccggaactgaatgcgttgctgcaagcg
gtaaatgcgccgcagctcacgcagttacgtagccagatgggtgaattcagcgaactgcgc
gaattgctggagaatgccatcatcgaatcaccaccggttttagtgcgtgatggcggcgtg
attgcgccgggttataacgctgaactggatgagtggcgcgccctggccgacggtgccagc
gattatctcgaccgtctggaaattcgtgagcgggaaaagctcgggctggatacgctcaaa
gttggctttaacgcgattcatggttactacattcaggtcagccgtggtcaaagccatctg
gtgcccatccactatgtacgccgccagacccttaagaatgccgaacgctatattattcct
gagctgaaagagtacgaagacaaggtgctgacctcaaaagggaaagcgctggcgctggaa
aaaggcctgtacgatgaattgtttgaccgtctgctgccacatctggaagcgctgcaatta
agcgcggcggcactggccgaactcgatgtgctgagtaacctggcggaacgcgcctggacc
ctcaactattgccgcccggtgctacaggaaaaagccgggatccgcatcacgggcggacgt
catccggtagtcgaacaggttttaaaagagccgtttatcgccaacccgctgtcactctcg
acccagcgacgcatgctgattatcaccggtcccaatatgggcggtaaaagtacctatatg
cgtcaggcggcactgattgcgctgatggcatggatcggcagcttcgttccggcggaagag
acggtgattggcccgatcgatcgcatctttactcgcgtgggtgcggctgatgatttggct
tccgggcgctccacttttatggtggagatgaccgaaacggccaatatcctgcataacgct
accgaacatagcctggtgttaatggatgaaatcggtcgcggcacctcaacctatgatggt
ctgtcgctggcctgggcttgtgccgagagcctggccaaccggattaaagcaatgacgcta
ttcgccacccactatttcgagctgacaacgctaccggaaaaaatggaaggcgtggtcaac
gtgcacctggatgccgtggagcacggtgacaccatcgcatttatgcatagcgtgcaggac
ggtgcggccagcaaaagctacggtttggccgtcgccgcgctcgcaggtgtaccgaaagag
gtgattaagcgcgctcgtcacaagctgaaggagttggaaacgttgtcgggcagcactgcc
gcctcaacggtcgaaggttcacagctcccgttattggtcgcggaaacgtctccggcggtg
gaagcactggaagcactcgatcccgatacgctgacgccacgccaggcgctggagtggatc
tatcgtttgaaaacgctggtgtag
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