Pantoea sp. At-9b: Pat9b_4722
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Entry
Pat9b_4722 CDS
T01386
Name
(GenBank) conjugative transfer relaxase protein TraI
Organism
pao
Pantoea sp. At-9b
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
TraI_C
AAA_30
TraI_2B
AAA_19
ssDNA_TraI_N
UvrD_C_2
DRTGG
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ADU72059
UniProt:
E6WKX4
LinkDB
All DBs
Position
pPAT9B02:2674..8490
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AA seq
1938 aa
AA seq
DB search
MMTIAPVASAADAAGYYSSQDNYYFLDDLQSQWLGEGARELGLEGPVDLDTLTAVLHGKL
PNGVELGKDVQGSHVHRPGHDLTFSAPKSISMLILAGGDKRLLAAHHEAVKETLALVEQM
VSARDTRDGVTRITATGKMVAALFTHDTSRNLDPQIHTHAVLANVTELDGKWKALATDTI
HGAGFIETLYRYQVSFGKLYRTALKGKTEALGYETELTGGKHELWEVKGFTGDVLEEFSS
RHREISARVGEEASLKSRDVAALDTRRPKQDISRLDDGQPVPQGEQPVTSPAGDNRSPDT
VPPGRAVPPQTLSRSDAPEQGKPDAADGREVARTAEPENTLSEAPGTEPEAPQPGEHPPG
RDSMNEQAGPDQESPIEKPETPDGRARLKARWQRQMDSVDFDIEGVMREARERVATREEP
GAETPLPGDVPEAVRTAISVLSDSRTRFTYGDLLLTAHQAGEQQHSIPDLRRALDRAISD
NLLAPLDGDKGVFTSHIHLLDELSVQSLAADIIKENRVVSFRGSPGMTPEHLKQAARAPV
AILNAPASVQRLRDTVEELVTMSRENGREVSVLASGAERALTLSKSALLKDTLLQRSRVT
EKTFSLAPQSTLIIEGAEKLGLKEMLVLTGEAREKNAQLLFLDSAGRQSNTNALSVLASA
GVERLSLTAPAPGLEARVFSIQDKRDRYRALAERFTDLSVPDSPVTAAVTGAREQQQLTG
YIRDALQNAGKLGRDTVEVEARTPVFITAKERKLPVSYRPGMVLEDRSDRQATRHFVIDR
VHDDTRMLSLIDGDGVLSRVKLSALTADWRLFTREQLSIAQGEQLFALAADRSAGLKARD
RLTVTALEDGALTVMREGQQKALRIATDRPLYVTHGYVSAPGARDNERGTVLASLSSREL
SANMMNALAQSGSEAEIFTGEALNRAEEKLMRLRTGRSPVALVRQASGREDVNDALETLN
ANLLTDAEKAVSRAVAQMRHVSFSEVKLLEEAEDFLENVPALRTEIARQVKAGGLMPVMV
GGESRFVSRATWEMEKAIVGEIAAGKNAVEPLMATLAPSLLTGLTAGQQAATTLILQSPD
RFTAVQGYAGTGKTTQFKAVRAAIETLPEGARPLIIGLAPTHRAVKEMRDTGIEAQTLKS
FVLDWQQRTAAGEEVRYGNTLFLIDESSMLGNQDTAAAYRAIAAGDGRAVQVGDVAQLES
PESGAPFRLMQERSPIDVAVMKEIVRQRDANLKSAVYSVIENKAAAALEKINRVSPGTVP
REAGEVVPSRSVTETGSPVRNIVADYIGRTKEAREQTMIVVQLHEDRRAINEAIHIRMVQ
RKELGGNAVTVPVLDRITGGRHDFNRIRDWKAGQVVLANERYLTVTGVDEGTDHVLLRDE
SGRMQYYSPAELNATEIEVFERREIELREGDSVRLNKTQKQAGHAAHEQYRVAALRDNGE
IVLQNREGEKVIDPKAVTADRHVDYAWAVTGYGAQGASTDYVIALEGTEGARANMSGMRA
FYISASRAKAHVQIYTDGLKDWMGTLQGRESGPATAHDALSPEPERAQARSIWAMGQPLS
KTAIGRAFLRGQGLKGAPLTARIIPPTKKYPDAHLALPVYDGNGKTAGLTLVPLTAEAGQ
PQPGEVRQLITGGAQAAIVQKSRNGETVIVSDLQQALAAARDKPQAGVLLLTGRHPPSAQ
LLKVAGGQPGRGWRPDATLLRLVQAELQEGLRDLPPDAPVPDERAALRAALDALEKGQEV
GQNVPSAPGRDSAQENSRDLRAIGQLLTEGAIASLTTVPVVTERDRAQLSALLAMRVVEA
MRQQLPFLPGEPVPDYAALVRQASAALAAEAGGPDSVAVRAVLDTLSGVTLPQEPGISAT
AGQSDSIPAGVLKQVQEALARDRVQPGAPQQQALSESTLAGVARELERRPELPSDTRGRE
PEREELTRESVRHIQKER
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccattgcaccggtggcgtccgcggcggacgcggccgggtactacagcagccag
gataactactatttccttgacgatctgcagagccagtggctgggcgagggggcccgcgag
ctgggcctggaaggaccggtggacctggataccttaaccgccgtactgcacggaaagctg
ccaaacggtgtggagctgggtaaagacgttcagggcagtcacgttcaccgtcccgggcat
gacctgacgttttcggccccgaaaagcatctccatgctcattctggccgggggggataaa
cgcctgctggccgcacatcatgaggcggtaaaggaaacgctggcgctggttgagcagatg
gtcagcgcccgtgacacacgggacggggtgacccgcatcacggcgaccggaaaaatggtg
gccgccctgttcacgcacgacacctcacgtaatcttgacccacaaatccacacccatgcg
gtgctggccaacgtgacagagctggacgggaagtggaaggcgctggccacggacaccatt
cacggtgccgggtttatcgaaaccctttaccgctatcaggtgtcattcggaaagctgtac
cgcaccgcgctgaaaggtaaaaccgaggcgctggggtatgaaaccgaactcaccggcgga
aagcatgagctgtgggaagtgaaaggtttcaccggtgacgtcctggaggaattttcctcc
cggcaccgtgaaatcagcgcacgcgtgggggaggaggcctcgctgaaaagccgggacgtg
gcggcacttgacacccgccgccccaaacaggatatcagccggctggatgacggccagccg
gtcccacagggtgagcagcccgtgacttcaccggcaggagataaccggtccccggatacc
gtgccgcccggacgggctgttccgccgcagacgctcagccgttccgatgcacctgagcag
ggcaagccagacgcggctgacggtcgcgaggttgcccgcactgctgagccggagaacacg
ctgtcagaggcgccaggcaccgaaccggaagcccctcagccgggagaacatccgcccggc
cgcgacagcatgaatgaacaggccgggcctgaccaggaatcgcccattgagaaaccggag
acgccggacggtcgtgcccgcctgaaagcgcgctggcagcgtcagatggacagcgtggat
tttgacattgagggggtgatgcgtgaagcgcgcgagcgtgtggcgacgcgcgaggagccc
ggagcggagacgccgctgccgggtgacgtgccggaagcggtgcgcaccgccatttcggta
ctgagcgacagccggacgcgctttacttacggcgacctgctgctgacggcccaccaggcc
ggtgaacagcagcacagtatcccggacctgcgtcgcgcgctggaccgggccatcagtgac
aacctgctggccccgctggacggggataaaggcgtgttcacctcccacattcacctgctg
gatgaactgtccgtgcagtcgctggcggccgatatcataaaggagaaccgggtggtgagc
ttccgtggctcccccggcatgacgccggaacacctgaaacaggcggcgcgtgcgccggtg
gccatcctgaacgccccggcgtcggtgcagcgcctgcgcgatacggtggaggaactggtg
acaatgtcacgggaaaacggccgggaagtcagcgtcctggcctccggcgccgaacgcgca
ctcaccctcagcaaatcggcactgctgaaagataccctgctgcagcgcagccgcgtcact
gagaaaaccttcagtctggcaccccagagcacgctgattattgagggggcagagaagctg
gggctgaaggagatgctggtcctgaccggcgaggcgcgggagaagaacgcccagctgctg
tttctcgacagcgccggccgtcagtcgaacacgaatgccctgtcggtgctggcctctgcc
ggcgttgaacgcctgagcctgacggcacccgcaccggggctggaggcgcgcgttttcagc
attcaggacaagcgtgaccgctaccgtgccctggcagaacgctttaccgacctgagcgtc
ccggacagtccggtcacggcggccgtgaccggcgcgcgtgaacagcagcagctgacgggg
tacatccgcgatgcgctgcagaatgccgggaagctcggccgggacactgtggaggtggag
gcccgcacgccggtctttatcacggcgaaagagcggaagctgccggtatcataccggccc
ggtatggtgctggaagatcgcagcgaccggcaggccacccgccactttgtgattgaccgg
gtgcatgacgacacccgcatgctgtcgctcatcgacggcgacggggtgctgagccgggta
aaactcagcgccctcaccgccgactggcgtctgttcacacgggaacagctgagtatcgca
cagggggagcagctgttcgcgctcgccgcagaccggtctgccgggctgaaggcgcgcgac
cgcctgaccgtcacggcgctggaggacggggcgctgacggtgatgcgggaggggcagcag
aaggcgctgcgcatcgccacggaccgtcccctgtacgtcacccacggttacgtcagcgca
ccgggcgcacgggataacgaacggggcacggtgctggcaagcctgagcagccgggagctg
tcagccaacatgatgaacgccctggcgcagtccggttcagaggccgaaatctttaccggc
gaggcgctgaaccgggcggaggagaagctgatgcggctgcgcaccggccgttccccggtg
gcgctggtcagacaggccagcggccgggaggacgtcaacgacgcgctggagacgctgaat
gcgaacctgctgacggatgcggagaaggccgtatcccgcgccgtggcgcagatgcggcat
gtgtccttttccgaggtaaaacttctggaggaagcggaggattttctggagaacgtgccg
gcgctcaggaccgaaattgcccgtcaggtgaaagccggcgggctcatgccggtgatggtt
ggcggtgaatcgcgctttgtctcccgcgcaacgtgggaaatggaaaaggcgatagtcggg
gagattgcggccggcaagaatgcggtcgagccgttgatggccacccttgccccgtccctt
ctcaccggcctcaccgccggacagcaggccgccaccacgctcattctgcagagtcccgac
cgctttacggcagtacaggggtatgccggtaccggtaaaaccacgcagtttaaggccgtc
agggcggccattgagaccctgccggagggcgcgcgaccgctgattatcgggctggccccc
acacaccgtgcggttaaagagatgcgcgataccggcattgaggcgcagacgctgaaatcg
ttcgtgctggactggcagcagcgcaccgccgccggtgaagaggtccgctacggcaatacc
ctgtttctcatcgatgagtcctcgatgctgggtaaccaggacacggccgcggcgtaccgt
gcgattgcggccggtgacgggcgcgccgtgcaggtcggggatgtggcgcagctggagtcc
ccggagagtggcgccccgttccggctgatgcaggagcgcagcccgattgatgtcgccgtg
atgaaagagattgtgcgccagcgcgacgcaaacctgaaatctgccgtctacagcgtgatt
gaaaacaaggcggccgcggccctggagaaaatcaaccgggtgtcaccggggacggtgccg
cgggaagccggtgaggtggtcccgtcgcgctcggtgacggagacgggctcaccggtcaga
aacatcgtggcggattacatcggccgcacgaaagaagcccgggagcagacgatgatcgtg
gtgcagcttcatgaggaccgtcgcgccatcaatgaggctatccacatcaggatggtacag
cgaaaagaactgggcgggaatgccgtcacggtgccggtactggaccgcatcaccggcggt
cgccacgactttaaccgcatcagggactggaaggccggtcaggtggtgctggcgaatgaa
cgctacctgaccgtgaccggggtggatgagggaacggaccatgtgctgctgcgcgatgaa
agcgggcggatgcagtattactcgccggcggagcttaacgccaccgaaatcgaggtgttt
gagcggcgtgaaatcgagctgagggagggcgacagcgtgcgcctgaacaagacgcagaag
caggccggtcacgccgcgcacgagcagtaccgtgtggcggcgctgcgggataacggtgag
attgtgctgcagaaccgggagggtgaaaaggtcatcgacccgaaggccgtcacggcggac
cggcatgtggactatgcctgggcggttaccggctacggtgcccagggggcgagtacggac
tacgtgattgcgctggaagggacggagggggcccgcgcgaacatgagcgggatgcgggcc
ttttacatcagcgcctcacgtgcgaaggcgcatgtgcagatttacaccgacggtctgaaa
gactggatgggcaccctgcagggcagggagagcggtccggcaaccgcgcacgatgccctg
tcaccggagccggagcgggcacaggcccggtccatctgggcgatggggcagccgctgtcg
aaaacggcgatcgggcgcgccttcctgcgcgggcaggggctgaagggggcaccgctcacc
gcccggattatcccgccgacgaagaaatacccggacgcgcacctggcgctgccggtgtat
gacggcaacggcaagacggcggggctgacgctggttccgctgacggcggaggccggtcag
ccacagccgggtgaggtgcgtcagcttatcaccggtggggcacaggctgccattgtgcag
aaaagccggaacggagagacggtcatcgtcagtgacctgcagcaggcgctggcagccgca
cgggataagccgcaggcgggcgtgctgctgctgaccgggcgtcatccgccgtcggcccag
ttactgaaagtggccggtggccagcccggacggggctggcgtcctgatgccacactgctg
cgtctggtacaggctgagcttcaggaggggctgcgcgacctgccgccggatgcaccagtg
cccgatgagcgtgccgcactgcgtgcagccctggacgcactggaaaaaggccaggaagtc
ggtcagaacgttccgtccgcgccaggacgggacagtgctcaggagaacagccgtgacttg
cgtgccattggacagctgctgacagagggcgcgatagccagcctgaccaccgtcccggtg
gtgacggaacgggacagggcacagctgtctgcgttgctggccatgcgggtggtggaggcc
atgaggcagcaactgccgttcctgcccggcgaacccgtacctgactatgccgccctggtc
agacaggcttcagctgcactggcggccgaagccggcggcccggacagtgtagctgtccgc
gccgtgctggacacactgtccggggtcacgctgccgcaggagccgggaatttctgccact
gctggccagagtgacagcataccggcaggggtactgaagcaagtacaggaggcgcttgca
cgcgatcgggtacagccgggggcaccccaacagcaggcgctgtcagaaagtacacttgcc
ggcgtggcccgtgagcttgaacggcggccggagctgccgtcagacacacggggccgggag
ccggaacgtgaagagctgacacgcgagagcgtccggcatatccagaaagaacgctga
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