Pandoraea apista: SG18_03025
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Entry
SG18_03025 CDS
T03588
Name
(GenBank) hypothetical protein
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
papi
Pandoraea apista
Pathway
papi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SG18_03025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
papi03400
]
SG18_03025
Enzymes [BR:
papi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SG18_03025
DNA repair and recombination proteins [BR:
papi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SG18_03025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJE97398
LinkDB
All DBs
Position
complement(2643696..2647118)
Genome browser
AA seq
1140 aa
AA seq
DB search
MLHLFFSNRFTTLEAALLRDIAQAPGSAGEAENPFETETIVVPSVAVRRRLELDYADVFG
VCANVRLTYLAQWLWDMAGKLLTVPESSPFAPDRLVWPLYQCLAQPWVETSPRLSGYLSG
ADDVMRFELADRLAHIYDQYLTYRPNWLERWQSGEVIEPGAAAGWGEVQRDDEAWQSALW
RQVLAHLEIRERHPTLRAIDRIEQLTPETVPAGWPSRVSVFALSSMPPLSMALLKAMSRL
IDVHLYVLNPCESYWFDIVPPSRLSYLTRRDGVAHREVGHPLLAEWGRQTQSHIDALYAD
LAPQAVEDRALFQPNPAPTLLAALQNGILTLDDGRHGAPDGVGADGSVQVHVCHSLARQI
EVLHDRLLACFDEIPDLRPDDVLITVPDLGRAAPLIDAVFGTATPRIPYLVTGLPPTRTN
PVARAFAAILALPQQRVAASSLVELARTEAIAQRYDLGGNVLDAIQNWLHAAGARRGWRG
DALLRLDAPRTPTAPAAVAGGAPALERHTLGDAMMRLFLGYALPDESMPVDDWLPVGGIE
GGRAELLGQLARLIDDLDATAVALQTERTGLAWRDQLLAMLEQFFSDEPRYADDVAEVRM
AIEQIGSAIADGAPEVQVPVEVVARVLADALDDPTRGGVPSGRVTFAAIPSLRLLPYRVV
CMIGMDDGVLPGRVRADEFDLMRALPQRGDRQRRDDERNLFLDLMLSAQDRFLLTYTGRS
VRDNAPLPPSTAVDELLDFTGQLLAPVSQGYDLDDQRKARERLVVLHPLQPFSPAYFDGR
DASLFSYDVSNGEAARQLADQLASPAPEAPAAPFVREPLPAVAQTHLTLDDLLRFWRHPG
RAWARDRLGLSLGEMLTEVDDEEPFALDWAGRDALAARLLPRLLHHDGRDMRTHVDAIER
IANVSHELPGGATGAVWRRRELGGLRALATQVREAQAEGTQELLVTLPLKPALPPSWRES
TEAAWHGDATLSADCLLQGRLAPVSRYGLVMYRYGSMRPSDLLAAWLAHLALCAHLQQPE
HAGLDVVARTLWYGEDETFALRPVDDAATLLGQWVALYRLGQTRPLPFFARSAWKLASTG
KPGEAESAWQGSAFARGDADDPYTRLIWRGIDDPLASPFDLLANTVFGPVVQHLEVVEGA
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctattcttctccaatcggttcaccacgctcgaagccgcgctgctgcgagat
atcgctcaagcgcccggcagcgcgggtgaagcggaaaatccgttcgagacggaaaccatc
gtcgtgccaagtgtggcggtgcggcgacggctcgaactggactatgccgatgtctttggg
gtgtgcgccaacgttcgtctgacctatctcgcccaatggctgtgggacatggcgggcaag
ttgctcacggtgccggaaagttcgccgtttgcgccggaccgcctcgtctggccgctgtac
cagtgtctggcgcaaccctgggtggagacctcgccgcgtctgtcgggctatctgtcggga
gcggacgatgttatgcgcttcgaactggccgatcgtctggcgcatatttacgaccagtac
ctgacctaccggccgaactggctcgaaaggtggcaatccggtgaagtcatcgagccgggg
gctgctgcgggctggggcgaagttcagcgcgacgacgaagcctggcagagcgcgttgtgg
cggcaggtgctggctcatctggagattcgtgaacgtcacccgacactgcgggcgatcgac
cggatcgagcaattgacgcccgaaacagtgccggccggatggccgtcgcgtgtttccgtg
tttgcgctgtcctcgatgccaccgctgtcgatggcgttgctcaaggcgatgtctcgcttg
atcgacgtccatctgtatgtactcaatccgtgcgaaagctattggttcgatatcgtgccg
ccgtcgcgtctgtcgtatctgacgcgccgtgacggcgttgcacatcgggaagtggggcat
ccgttgctcgccgaatgggggcgtcagacgcagtcgcacatcgatgcgctgtatgcggac
cttgccccgcaagccgtggaggatcgggcgctgtttcagccgaatcccgcgccgacgcta
ctcgccgccttacagaacggcattcttacgctcgacgacggccggcatggggcgcccgac
ggtgtgggtgccgacggatcggtgcaggtgcatgtctgccatagtctggcgcgacaaatc
gaggtgctgcacgacagattgctcgcgtgcttcgacgagattcccgatctgcgccccgat
gacgtgctgattaccgtgccggatctggggcgcgcggccccgctgatcgacgcggtattc
ggtaccgcaacgcctcgtattccctatctggtgaccgggctgccgccaacgcggaccaat
cccgttgcccgcgcctttgccgcgattctggcattgccgcaacagcgcgtggcggcgtcg
agtctggtggagctggcgcgaacggaggccattgcgcaacgctacgatctgggcggcaac
gtactcgacgcgattcagaactggctacacgccgccggtgcccggcgcggctggcgtggc
gacgcgctgttgcgactcgacgccccgcgcacgccgacggcgccggccgctgtggcgggg
ggcgcgcccgcgctggagcggcatacgctgggcgacgccatgatgcggttgttcctcggc
tatgcgttgccggacgagtcgatgcccgtggacgattggcttccggtcgggggcatcgaa
ggcgggcgtgccgaattgctgggacaactggcgcgactgatcgacgatcttgatgcgacc
gccgtggcattgcaaaccgagcgtaccggactcgcgtggcgtgatcagttgctggccatg
ctggagcagtttttctctgacgaaccacgctatgccgacgatgtcgccgaagtgcgcatg
gccatcgagcagatcggttccgccattgccgatggcgctcccgaggtgcaggtgccggtc
gaagtggtggcgcgtgtgctcgccgatgcgcttgacgatccgacgcgtggcggtgtgccg
tcgggccgggtgacgttcgcggcaattccaagcctgcgtctgctgccgtaccgcgtggtg
tgcatgatcggtatggacgacggcgtattgcccgggcgtgtgcgtgccgacgagttcgac
ctgatgcgcgcgttgccgcagcgtggcgatcgccagcgtcgcgacgacgagcgcaatctc
ttcctcgatctgatgctgagcgcgcaggatcgatttttgctgacctatacagggcgaagt
gtgcgcgataacgcgccgctgccaccctcgactgccgtcgatgaactgctcgacttcacc
gggcagttgcttgccccggtgtcgcaggggtatgacctcgacgatcagcgcaaggcacgg
gagcgtctcgtggtgttgcatccgttgcaaccgttttctcccgcctatttcgacgggcgc
gatgcgtcgctcttcagctacgacgtgtccaatggcgaggccgcccggcagttggcggac
caattggcgtctcccgcccccgaggcgcctgctgcgccctttgtgcgcgagccgttgcct
gcggttgcgcaaacccatctgaccctcgacgacctgcttcgcttctggcgtcacccgggc
agagcgtgggcgcgcgaccggctgggtctgtcgctcggcgagatgctgacggaggtagac
gacgaagagcccttcgcgctcgactgggccggacgcgatgcgttggcggcacggctgctg
ccgcggctcctgcatcacgacggacgcgatatgcgcacgcacgtcgacgccatcgaacgc
atcgcgaacgtgagccacgagttgccgggcggagcaaccggcgcggtctggcgtcgaagg
gaattgggcggtctgcgcgcgctggcgacgcaggtgcgagaggcgcaagccgaaggcacg
caggagcttctggtgacgctgcctttgaagcccgcgttgccgccgtcatggcgcgagtcg
acggaggcagcctggcacggcgacgcgaccttgtctgcggattgcctgttgcaagggcgt
ttggcgcccgtttcccgttacgggttggtgatgtatcgatatggcagcatgcgcccgagc
gatctgctggcggcgtggctggcccatctcgcgctttgtgcgcatctccagcagcccgaa
catgccggtctggatgtcgtggccagaaccctgtggtacggcgaagacgagacgtttgcc
ttgcgtccggtcgacgacgcggcaacgctgctggggcaatgggtggcgttgtaccggctg
gggcagacccggccgctgccgttctttgcccgcagcgcctggaagctggcgagcacgggc
aagccgggcgaggcagagagcgcgtggcagggttccgcctttgcgcgcggcgacgcagac
gatccgtacacacggttgatctggcgtggcatagacgacccgctcgcgtcgccgttcgat
ttgctcgccaacacggtgttcggcccggtggtgcagcaccttgaagtcgtggagggcgca
tga
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integrated database retrieval system
