Pantoea ananatis PA13: PAGR_g2940
Help
Entry
PAGR_g2940 CDS
T01970
Name
(GenBank) excinuclease ABC subunit B UvrB
KO
K03702
excinuclease ABC subunit B
Organism
paq
Pantoea ananatis PA13
Pathway
paq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PAGR_g2940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paq03400
]
PAGR_g2940
DNA repair and recombination proteins [BR:
paq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PAGR_g2940
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PAGR_g2940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
SBDS_domain_II
UB2H
AAA_30
Helicase_C_2
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AER33436
LinkDB
All DBs
Position
complement(3187331..3189352)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKDFKLNSAFKPSGDQPEAIRRLEAGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMIIDQRSILRRLSELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDMALRVELFDEEVERLSLFDPLTGQVESVVPR
FTIYPKTHYVTPRERILQAMEDIKVELADRRKTLLENNKLLEEQRITQRTQFDLEMMGEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGKYELEKSGDEVIDQVVRPTGLLD
PILEVRPVATQVDDLLSEIRQRVTINERVLVTVLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMARAIEETERRREKQQRHNEENGIVPQGLNKKITDILELG
NNVVKTRGKAKPAKRNAAEADADYLALSPQALQKKIHELEGQMQQHAQNLEFEQAAGLRD
QLQELRTLFIAVS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagattttaaactgaactccgctttcaagccttccggcgatcagccagaggcg
atccgtcgtcttgaagccggactggaagatggcctggcgcaccagacgctattaggcgtt
accggatcgggtaaaacctttaccgtggctaacgtgatcgccgatcttaaccggcccacc
atggtgctggcaccgaacaaaacgctggcggcccagctgtatggtgagatgaaggagttt
ttcccggacaacgcggtggagttttttgtctcctattacgattactaccagcctgaagcc
tatgtcccaagctctgacacctttatcgaaaaagacgcctcggttaacgaacacatcgag
cagatgcgtctttccgccactaaagcattactggagcggcgtgatgttatcgtcgttgcc
tcagtgtcggccatttacggtctgggcgatcccgatctttatctgaaaatgatgctgcac
ctgacgcgcggtatgatcatcgaccagcgcagcattctgcgtcgcttgtcagagctgcag
tacacgcgcaacgaccaggcgtttcagcgcggcaccttccgggtgcgtggcgaggtcatc
gatatttttccggcagagtccgatgatatggcactgcgggtggagttatttgacgaagag
gtcgagcgcctgtccctgtttgatccgctcaccgggcaggttgaatcggttgtaccgcgt
tttaccatctatccgaaaacgcactacgttacgccgcgtgagcgcattctgcaggccatg
gaagacatcaaggttgaactggccgaccggcgtaaaaccctgctggaaaacaacaaactg
ctggaagagcagcgcatcactcagcgcacccagtttgatctggagatgatgggcgagctg
ggctactgctccggcatcgaaaactactcgcgttacctgtcgggccgtgggccgggagag
gcgccgcctacgctgtttgactatctccccgcagatggcctgctggtggtggatgagtcc
cacgtcacgattccccaaattggcggcatgtaccgtggcgaccgtgcacgtaaagagacg
ttggtagagtacggtttccgactgccttcggcgcttgataaccgtccgatgaagttcgaa
gagtttgaagcgctggcccctcagacgatctatgtgtcggcaacgccgggcaaatatgag
ctggagaaatccggcgacgaggtcatcgatcaggtggtgcgtccaaccggcctgctggat
ccgattcttgaggtccgccccgtggcgacgcaggttgatgatttactgtctgagatccgc
cagcgcgttacgatcaacgagcgtgtcctggtgaccgtcctgactaaacgcatggcggaa
gatctgacagagtaccttgaagagcacggtgaaaaggtgcgctatctgcactcggatatc
gacacggtggaaaggatggaaatcattcgtgacctgcgcctgggcaaatttgacgtactg
gttgggatcaacctgttgcgagaagggctggacatgcctgaggtatcgctggtggccatt
ctggatgcggacaaagagggcttcctgcgttcggagcgttcgctgattcaaaccattggt
cgtgcggcacgtaatattaacggtaaagcgattctgtatggcgacaagatcacgccttca
atggccagagcgattgaagaaacggaacgccgccgtgagaagcagcagcggcataacgaa
gaaaacggcatcgtgcctcagggcctgaacaagaaaatcaccgatatcctggaactgggc
aataacgtggtgaaaacgcgtggtaaagccaagcccgctaagcgcaatgccgctgaggca
gacgccgattacctggcgttgtccccccaggcgttgcagaaaaagatccacgagctggaa
gggcagatgcagcaacatgcgcaaaacctggagttcgaacaggcggcgggcctgcgcgat
cagctgcaggaattgcgcacattgtttattgcggtgtcctga
DBGET
integrated database retrieval system
