Candidatus Paraluminiphilus aquimaris: E0F26_06475
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Entry
E0F26_06475 CDS
T09832
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
paqm
Candidatus Paraluminiphilus aquimaris
Pathway
paqm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paqm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E0F26_06475 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paqm03400
]
E0F26_06475 (uvrB)
DNA repair and recombination proteins [BR:
paqm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E0F26_06475 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E0F26_06475 (uvrB)
BRITE hierarchy
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
Kinesin
AAA_5
HEM4
SWI2_SNF2
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
UZP74406
LinkDB
All DBs
Position
1404752..1406776
Genome browser
AA seq
674 aa
AA seq
DB search
MAKQFDLQSSYQPAGDQPGAIDQLINGIGAGLASQTLLGVTGSGKTFTMANVIHKLQRPT
IVMAHNKTLAAQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDAQVNDHIE
QMRLSATKALLERPDCLVVSTVSSIYGLGDPQSYFKMIMHLSRGEIINQRGILRQLAELQ
YTRNDLDFKRGTYRVRGDVIDIFPADSDELAIRIELFDEEIENICSFDPLTGAVEEKLPR
ITIFPKTHYVASRDTMLSAVDLIEEELELRVKQFKEAEKHLEAQRIAQRTRYDIEMIREL
GYCQGIENYSRYLSGRAPGEPPPTLFEYLPDNALMIIDESHVTVPQIGAMYRGDRSRKET
LVEYGFRLPSALDNRPMKFEEWESMAPQAIFVSATPGKYENENAGATVEQVVRPTGLVDP
IVEIRPARTQVDDLLAEIRETTAKGDRVLVTTLTKRMSEDLTEYLSEHDVRVRYLHSDID
TVERVEIIRDLRLGHFDVLVGINLLREGLDMPEVSLVTILDADKEGFLRSDRSLIQTIGR
AARNLNGRAILYADKMTGSMERAINETQRRRDKQLEFNEQNGVVPKGIEKSVRDILEGAR
RMPTKARGARETKIANDRASFAQEIMSMTPAALSRKLNALENTMAEHAKNLEFEEAASVR
DQIAELKQIAFIGA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaacaatttgatcttcaatcttcgtatcaaccggcgggtgatcagcccggcgcg
atagaccaattgattaatggcattggagcgggcctcgcgtcacagacactgctgggtgta
accggtagtggtaaaaccttcacaatggccaacgtgattcacaaattgcagcgtccaacg
attgttatggcgcacaataagacgctggctgcgcagttatacggcgaatttaaagaattt
ttccctaataacgcggttgagtatttcgtgtcctactacgactactatcagccagaagcc
tacgtgccttcctctgacacattcattgagaaggacgcgcaggtaaacgaccatatcgag
cagatgcgactgtcggcaacgaaagccttgctggagcggcccgactgtctcgtggtttca
accgtttcgtcaatttatggtcttggcgacccgcagtcttatttcaagatgattatgcat
ttgtcgcgcggtgagattatcaatcagcgcggtatcttgcggcagcttgccgaattgcaa
tacacccgaaatgacttggacttcaagcgcggtacttaccgagtgaggggtgacgttatt
gatatcttcccggcagactccgatgagcttgctattcggatcgagctctttgatgaagag
atagaaaatatttgcagcttcgaccctctcacgggcgcagtagaggaaaaacttcccaga
atcacgattttccctaaaacccactatgttgcgtcaagagacaccatgttaagtgctgtt
gatctgatcgaagaagagcttgaactgcgcgtaaagcagtttaaagaggcagagaagcac
ctagaggcacaacgtattgcccagcgcactcgatacgatatcgagatgatacgagagttg
ggttactgccagggtatcgaaaattactctcggtacttatcaggtagggcgccgggtgag
ccgccaccgacgctttttgaatatttgcccgataacgcgctaatgattatcgatgagtcg
cacgtgacagtgccacaaattggcgctatgtatcgcggagaccgctctcgaaaagagacg
ctcgtggagtatgggttccggttgccttcagcgcttgataaccggccgatgaaatttgaa
gagtgggagtcaatggccccccaggcaatttttgtctctgcgacaccgggcaagtacgaa
aacgagaatgcgggtgctacggttgagcaggtggtcagaccaacaggtcttgttgaccct
attgttgaaataagaccggcccgtacccaggtcgatgatcttctagctgagatcagagag
accaccgccaagggcgaccgcgtgttagtgacaacactgacgaagcgtatgtcagaagac
cttaccgagtacttgagcgagcacgatgtacgcgtccgttacttacactctgacattgat
accgttgagcgagtggagatcatccgagatcttcggctcggccatttcgatgttcttgtg
ggcattaacttgcttcgagaggggctcgatatgccggaggtgtcactggtcactattttg
gatgcggataaggaagggtttttgcgaagtgacagatccctgattcaaaccattggtcgt
gcagcgcgaaacctgaatggccgcgcgattttatacgcggataaaatgacgggctcgatg
gagcgtgccattaacgagacccagaggaggcgtgacaagcaactcgaatttaacgagcaa
aatggcgtagtgccaaagggtattgagaagtctgtccgcgatattctagagggtgcgagg
cggatgcccacaaaagcgcgaggtgcgcgtgagacaaagattgcaaatgacagagcaagc
tttgctcaggaaataatgagcatgacgccagcggcgttgtcgcgtaaattaaacgcgtta
gaaaatactatggctgagcatgcgaagaacctagagtttgaagaggcggcatcggtgcga
gatcagatcgcagagctgaaacaaatcgccttcatcggtgcttaa
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