Pectobacterium aquaticum: DMB82_0012125
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Entry
DMB82_0012125 CDS
T07653
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
paqu
Pectobacterium aquaticum
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paqu03009
]
DMB82_0012125 (rluC)
Enzymes [BR:
paqu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
DMB82_0012125 (rluC)
Ribosome biogenesis [BR:
paqu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DMB82_0012125 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Fmp27_SW
TGS
Motif
Other DBs
NCBI-ProteinID:
UEM37945
LinkDB
All DBs
Position
complement(2596800..2597756)
Genome browser
AA seq
318 aa
AA seq
DB search
MKTDNPSVQFVTISADEAGQRVDNFLHTHLKGVPKSMVYRILRKGEVRINKKRVKPEYKL
LDGDVIRIPPVRQAERDETPISASFGKVAALAECIIYEDDYLLVLNKPSGTAVHGGSGLS
FGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLRLKGMQKDYLALV
RGQWQSHCKVVQAPLLKNILQSGERIVRVNSDGKPSETRFKIEERFEHATLVRASPVTGR
THQIRVHAQYAGHPIAFDDRYGDREFDQQLVGTGLKRLFLHAQALRFEHPNTGETLRVEA
PLDSALRRCLQALRKTKV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagataatccttcagtacaatttgtgacgatctccgcagatgaagcggggcag
cgcgtcgataattttttgcatacccacttaaagggtgtgcctaaaagcatggtttaccgt
atcttgcgaaaaggtgaggtaaggataaataagaaacgggtcaaacctgagtataaattg
ctcgatggtgatgtcatccgtattccgcccgttcggcaggcagaacgcgatgagacccct
atttctgccagttttggtaaagtggcggcgttggccgagtgcattatttatgaggatgac
tacctgttggtgctgaataaaccctcgggtacagcagtgcatggtggcagtggcttgagc
ttcggcgtgattgaagggctgcgtgctttacgcccggaagcgcgttttctggagttagta
caccgtctcgatcgcgatacctctggtgttttgctggtcgcaaaaaaacgctcggcttta
cgttctctgcacgaacaactgcgactaaaaggcatgcaaaaagactatctggcgctggtt
cgtgggcagtggcagtctcactgcaaggtcgttcaggctccactgttaaagaatatcctg
caaagcggtgaacgcattgtacgggtaaacagcgacggtaaaccgtcagaaacgcgcttt
aaaatagaagagcgctttgaacacgcgacgctggtgcgggctagccctgttactgggcgt
acgcaccaaattcgtgtacacgctcagtatgccggacatccgatagcgtttgatgatcgt
tacggcgatcgcgaattcgatcagcaactggtaggcacaggtctaaaacgtctattcctg
catgcacaggcgctgcgttttgagcatccgaacaccggtgagacactgagagtcgaagct
ccattagatagcgcactgcgtcgctgtctgcaagcactgcgcaagacaaaagtataa
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