Pectobacterium aquaticum: DMB82_0017960
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Entry
DMB82_0017960 CDS
T07653
Symbol
rsgA
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu00730
Thiamine metabolism
paqu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DMB82_0017960 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paqu03009
]
DMB82_0017960 (rsgA)
Enzymes [BR:
paqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
DMB82_0017960 (rsgA)
Ribosome biogenesis [BR:
paqu03009
]
Prokaryotic type
GTPases
DMB82_0017960 (rsgA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
FeoB_N
GTP_EFTU
AAA_29
AAA_16
ABC_tran
cobW
IIGP
nSTAND1
MMR_HSR1_Xtn
AAA_22
SMC_N
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UEM38992
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All DBs
Position
3867912..3868961
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AA seq
349 aa
AA seq
DB search
MSKKKLSKGQQRRVSANHQRRLKKTESKVEWEDSQLGDAQEGIIISRFGMHADVEATDGV
VHRCNIRRTISSLVTGDRVVWRPGHESLAGISGIVEAVHPRHSVLTRPDYYDGIKPIAAN
IDQIVIVSAILPELSLNIIDRYLVACETLEIDPLIVLNKIDLLDDKSRQFVDKKMDIYRA
LDYRVLMVSSHTQQGIPELEQALTDRISIFAGQSGVGKSSLLNALLALGEERILVNEVSD
NSGLGQHTTTASRLYHFPHGGDVIDSPGVREFGLWHLEPEQVTSGFIELRKHIGSCKFRD
CKHENDPGCAINAALARGEIATERFDNYHRILESMAQVKTRKGFSDTEN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaaaagaaactgtcgaaaggtcagcagcgtcgggttagcgcaaaccaccagcgt
cgcctgaaaaaaacggaaagcaaagtcgaatgggaagatagccaactgggcgatgcgcag
gaaggtattatcatcagccgattcggtatgcacgccgatgtggaagccaccgatggcgtg
gtgcaccgctgcaacattcgtcggaccatttcatcgctggtcacgggcgaccgcgtcgtc
tggcgccccggccatgaatcactcgctggcatcagcgggatcgtggaagccgttcaccct
cgccattccgtcctgacccgccccgactattacgatggcattaaaccgatcgccgccaat
atcgatcagatcgtgatcgtttcggcgatcttgcctgagctgtcgctgaacattatcgat
cgctatctggtcgcctgcgaaacgctggagatcgacccactgatcgtgctgaacaaaatt
gacttgctggatgacaaatcccgccagtttgttgataaaaaaatggatatctaccgtgcc
ctcgactatcgcgtgttgatggtttccagccatactcaacagggtatccccgaactggag
caggcactcactgaccgtatcagtattttcgccgggcagtcaggtgtcgggaaatccagc
ctgcttaatgcgctgctcgcactgggtgaagaacgcattctggtgaatgaggtgtctgat
aactcagggttggggcaacacactaccaccgcctcccggctttaccacttcccgcacggc
ggtgacgtgatcgactcaccgggcgtacgtgaatttggtctgtggcatctggagcctgaa
caggtgacgagtggtttcattgaattacgtaaacacatcggctcgtgtaagttccgcgac
tgtaaacatgaaaacgatccaggctgcgcgatcaatgccgcacttgcgcgcggagagatt
gccacagaacgctttgataactatcaccggattctggagagcatggcgcaagtaaaaacg
cgtaaaggcttttcggatacagagaactga
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