Psychrobacter arcticus: Psyc_1126
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Entry
Psyc_1126 CDS
T00256
Symbol
recD
Name
(GenBank) probable exonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
par
Psychrobacter arcticus
Pathway
par03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
par00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Psyc_1126 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
par03400
]
Psyc_1126 (recD)
Enzymes [BR:
par01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Psyc_1126 (recD)
DNA repair and recombination proteins [BR:
par03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psyc_1126 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
SH3_13
AAA_11
Viral_helicase1
AAA_22
Helicase_RecD
Herpes_Helicase
UvrD-helicase
SLFN-g3_helicase
PhoH
AAA_16
nSTAND3
AAA_24
UvrD_C
FtsK_SpoIIIE
AAA_7
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAZ18977
UniProt:
Q4FSN1
LinkDB
All DBs
Position
complement(1340502..1342706)
Genome browser
AA seq
734 aa
AA seq
DB search
MSNNNNKSRAAVSLQESWASNISDYILLRRQQTYLAYNVTDAKANFDSKPIDQREQNSLF
TALFVMLANHLEEGHTVLTVEVAEHELSLQGQINGELVTLYAWQQQLLEMLATPILALID
TQVDTHQEDDSTADPSLFGLLDTIFGQQAQLWAQLVLTNHEKEILIKRFDTVAALYQLVK
NTNLNSFIQSIHEHALFVEVNSDVNNNENKNSLSKNNKPIIYQITNNKNTIKPKVSLTFW
LHRAWQAEFNLAQRINNILDQKIKPLEISIPKNLNEQQVMAINVANNNAFSMITGGPGTG
KTYTVAQLVIALQQAAESGADKHEDIRFSTDSASLAIAAPTGKAAQRMQESLQAALDAAN
VELQLQEAKTIHRLLGIGRTGRPRYDANNPLGEDIIIVDEASMLGVELANYLVSAVKPGA
RLILLGDANQLAAVDAGAVLADLCRIPLLQPIHAELTESRRFSAESGIGKLAYQINQADA
DTQAIWQLLKQDVALSFQYVNALQAEITIGNKIQNSLSNNKIISNLTLNYQKYINKIKLL
IENPIEKSVPKAVKNTTASLMQTFNQFRILSAGHNGEWGDRYINKHLTQWHLAELKLPLG
QNTWFHGRPVMVLQNNYELGLFNGDIGFCLQTGDERSRLEVFFENKAQGIAVNLLNEEVI
ATAYAMTIHKSQGSEFDHVAITFDNSHARLLSKELIYTAVTRAKKQVSIYSTRHAFEKAI
QTPTERHTGLALQF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaataacaataagagcagagcggccgttagcttacaagagagttgggctagt
aacatcagtgattatattttgcttcgccgtcagcaaacgtatttggcgtataacgtgact
gacgcaaaggctaactttgatagcaaaccaatcgatcagagggaacaaaatagcttattt
acggccttattcgttatgttggccaatcatttggaagaggggcacacagtcttaactgtt
gaggtagctgagcatgaactttcactccaaggtcaaatcaatggcgagctagtgacacta
tatgcttggcagcagcaattattagagatgctagcaacgccaattctagcactcattgac
actcaggtagatacgcaccaagaggatgactctacagctgatccatcattatttggcttg
ctagacaccatatttggccagcaagctcagctatgggcgcagctggtactcaccaatcat
gaaaaagagatactcattaaacgttttgatacggttgctgcgctttatcagctagtgaaa
aacacgaatttaaactccttcattcagtccattcatgagcatgctttattcgttgaggtt
aattctgatgttaataataacgaaaataaaaatagcctaagcaaaaataataaacctatt
atatatcaaataactaacaacaaaaacaccattaagccaaaagtgtcactgactttttgg
ctgcatcgcgcatggcaagcagagttcaacttagcacagcgtatcaataatattttagac
cagaaaataaaacctctagaaatatcgatacccaaaaatctaaatgagcagcaggtaatg
gccattaatgtggctaataacaatgcattcagtatgattaccggtggcccaggcacaggt
aagacctatactgttgctcagttagtgattgcactgcaacaagctgcagagagcggggct
gataagcatgaagatattagattcagtacggacagtgccagcctagcaatagcagcaccg
actggtaaggctgcacagcgaatgcaggagtctttacaagcggctctagacgcagcgaat
gtggagctacaactacaagaagccaaaaccattcatcgtttgctaggtattggccgaacg
ggtagacctcgttacgatgcaaataatccactcggcgaagatattatcatcgttgatgag
gcatctatgctaggggttgaactggctaattaccttgtgagtgcagtgaaaccaggcgca
aggcttatattgttaggggatgctaaccagttagcggcggtagatgcaggggcagtatta
gctgacttgtgccgcattccattgctacaacccatacatgcagagctaacagagagtcgc
cgatttagcgcagaatcaggtattggtaagctggcctatcaaatcaatcaggcagatgca
gatactcaggctatttggcagttattaaaacaggacgtcgcgctgagttttcagtatgta
aatgcattgcaagcagagataactataggtaataagatacaaaatagcctaagtaataat
aagattatttcaaacctcactctaaactaccaaaaatatataaataaaattaagttgcta
atagaaaatccaatagaaaaatccgtgccaaaagcggtaaaaaatacaactgcttcatta
atgcaaacgtttaaccagtttagaattttaagtgctggccataatggcgagtggggggat
cgctatattaacaaacatctgactcagtggcatcttgctgagctaaaactacccttaggt
caaaacacatggttccatggtcgtcccgttatggttctacaaaacaactatgagctggga
ttgtttaatggtgatatcggtttttgcctacaaacaggagatgaaagaagtcgcttagaa
gtgttttttgagaataaagcgcaggggattgccgtcaacctattaaatgaagaggtcatt
gccaccgcttatgcgatgaccattcacaagtctcaagggtctgagtttgatcatgtggcc
attacctttgataatagtcatgccaggttgctgagtaaagagcttatttatacagcggtg
acacgtgctaaaaaacaggtaagcatatatagcacaagacacgctttcgaaaaggccatt
cagacaccgactgagcgccatacgggtttggcgctacagttttag
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