Paraburkholderia sp. SOS3: BTO02_14105
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Entry
BTO02_14105 CDS
T04966
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
para
Paraburkholderia sp. SOS3
Pathway
para03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
para00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BTO02_14105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
para03400
]
BTO02_14105
DNA repair and recombination proteins [BR:
para03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BTO02_14105
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BTO02_14105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
AAA_16
UB2H
IlvC
AAA_22
FlaG
Motif
Other DBs
NCBI-ProteinID:
APR36360
UniProt:
A0A1L6HZD8
LinkDB
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Position
1:complement(3163393..3165486)
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AA seq
697 aa
AA seq
DB search
MSEHHLREVDDTLDESKFVSFEGSPFKLYQPYAPAGDQPTAIQTLVEGVEDGLSFQTLLG
VTGSGKTYTMANTIARLGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMIL
TLRTGDRLGQREVIARLIAMQYTRNEADFQRGTFRVRGDTIDVFPAEHAEMAVRIELFDD
EIDTLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRETVMRAVETIKAELRERLEFFHSQGK
HVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGALPGEPPPTLVDYLPPDALMLLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFNEFERKMRQVVFVSATPADY
EKKTAGQVAEQVVRPTGLVDPEIEVRPARSQVDDVLGEINERVKAGERVLVTVLTKRMAE
QLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKAILYADNVTDSMRRAIDETERRRAKQIAYNA
QMGIVPRGVVKRIKDIIDGVYNADEARTELREQQQRAKFEDMSEKQLAKEIKRIEKQMMD
YAKNLEFEKAAQARDQLALLRRRVFGANVGDHLTGTD
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacatcacctgcgtgaagtcgacgacacgctagacgaatccaaattcgtctcg
ttcgaaggctcgccgtttaagctctatcagccgtatgcgccggccggcgaccagccgacg
gccatccagacgctcgtcgaaggcgtcgaagacggactgtcgttccagacgctgctcggc
gtgaccggctccggcaagacttacacgatggcgaacacgatcgcgcggcttggccgcccg
gccattgtgttcgcgccgaacaagacgctcgccgcgcagctgtacgcggagtttcgcgag
ttctttccgcgcaatgcggtcgagtacttcgtctcgtactacgattactaccagccggaa
gcgtatgtgccgcagcgcgacctgttcatcgagaaggactcgtcgatcaacgagcacatc
gaacagatgcgcctgtcggcaacgaaaagcctgatggagcgtcgcgacgtggtgatcgtc
gcgaccgtgtcggcgatctacggtatcggcaacccatccgaataccaccagatgattctc
acgctcagaaccggcgatcggctggggcagcgcgaggtgatcgcgcggctgatcgcgatg
cagtacacgcgcaacgaggccgatttccagcgcggcacattccgcgtgcgcggcgatacg
attgacgtgtttccggccgagcacgccgaaatggccgtacgcatcgagctcttcgacgac
gaaatcgacacgctgcagctgttcgatccgctcacgggccgtgtgcgccaaaagattccg
cgttttaccgtctatccgtcgtcgcactatgtcacgccgcgagaaaccgtgatgcgcgcc
gtcgaaacgatcaaggccgaattgcgcgagcggctcgagttcttccattcgcaaggcaag
cacgtcgaagcgcagcggctcgagcagcgcacgcgcttcgacctcgagatgctgcaggaa
ctcggcttctgcaaaggcatcgagaactactcgcggcatttctccggtgcgctgccgggc
gagccgccgccgacgctcgtcgactatctgccgcccgatgcgctgatgctgctcgacgag
tcgcacgtgttgatcggtcagttgaacggcatgtacaacggcgatcgcgcgcgcaaggaa
aacctcgtcgattacggcttccggctaccttcggcgctcgacaaccggccgctcaagttc
aatgagttcgagcgcaagatgcgtcaggtcgtgttcgtgtcggcgacgcctgcggactac
gaaaagaagaccgcgggccaggtggccgagcaggtcgtgcggccgaccggcctcgtcgat
ccggagatcgaagtgcgcccggcgcgcagccaggtcgacgacgtactcggcgaaatcaac
gagcgtgtgaaggccggcgagcgcgtgctcgtcacggtgttgacgaaacgcatggccgaa
cagctgaccgagttcctcgcggaccacggcgtcaaggtgcgctatctgcacagcgacatc
gatacggtcgagcgcgtcgaaatcatccgcgatctgcggcttggcacgttcgatgtgctc
gtcggcatcaacctgctgcgcgaggggctcgacatccccgaagtgtcgctcgtcgcgatt
ctcgatgcggacaaggaaggctttctgcgcgccgagcgctcgctgatccagacgatcggc
cgcgccgcgcgtaacgtgaacggcaaggcgattctgtatgcggacaacgttacggattcg
atgcgccgcgcgatcgacgaaaccgagcggcggcgcgcgaagcagatcgcctacaacgcg
cagatgggcatcgtgccgcgcggcgtggtcaagcggatcaaggacattatcgatggcgtc
tacaacgcggacgaagcgcgcaccgaactgcgcgagcagcaacagcgcgcgaagttcgag
gacatgtccgaaaagcagctcgcaaaggaaatcaaacgcatcgaaaagcagatgatggac
tacgcaaagaacctcgaattcgaaaaggcggcgcaggcgcgcgatcagctcgcgctgttg
cgccggcgcgtattcggcgcgaacgtcggcgaccatctgaccggcaccgactga
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