Paraburkholderia aromaticivorans: CJU94_10975
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Entry
CJU94_10975 CDS
T05169
Name
(GenBank) DNA-binding protein
Organism
parb
Paraburkholderia aromaticivorans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_23
HTH_28
HTH_38
CENP-B_N
HTH_7
GerE
HTH_29
HTH_Tnp_ISL3
HTH_Tnp_1
HTH_5
HTH_20
Sigma70_r4_2
Sigma70_r4
HTH_32
MarR_2
HTH_3
Trp_repressor
HTH_24
TnsD
DNA_pol3_delta_C
PAX
HTH_11
Sigma70_r3
HTH_50
KORA
TetR_N
HTH_Tnp_4
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
ASV98648
UniProt:
A0A248VI44
LinkDB
All DBs
Position
1:2385177..2389034
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AA seq
1285 aa
AA seq
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MTISPASGSTSPVREDLYKANKDTGKPEPAANALPNPAVTPPVASQAGSKKNDAPGRRAG
PSTSAALSSRQTCGEALPVQVGHATARARAPDALSSENRSARAVPARAGAIAAGDLNGLN
GKSSAGAANAPQVTQPTDMLPAASTEEFKELNRKYDTVDGYAHRSSETNSRIAQEIEAGI
QQEMTGYPPQVIRFQERQTHLQGMLSELPDSERQFYGGVLATVGAAYQLETDGDKRYVLD
QKLAGLEHTVREEVNRARNDPVDRVLGQFNPPMGEAYLNKEDRERSGSLDKLREQFLGAA
DAGERESIFAEASDLKSKLQGRISVEVGKRQRVEHAQWKEANGEVDRILREAEAQTDPAR
RYELIGRQLFQINPGEDALKDKVVLAFTERMHDSPPLRDKLDTWHDHVSGPLNAQSVGAA
KKYTDILSNLPPVSADYVRDLSDRYNAVLQDVTYKDDSITPAARAEKTAGQVLEGVERVL
LGLTPLAPLADLQPSTLPDNVRMGLDYGSALLGMLGGEGWGIAREIGLAGKAVSAAARDA
EAANLAGEGGATAGKGLVQSAGKGVLEGLQAEQTLSRDARAAEQALLEKTLAEAGPAVDP
TSLLAHQSVADGPHGSLVNYADPDVSLKDLRAGPTRGILVDAKGDRYIELGGKAYHARFD
RDTDSWRVFNKGADLKPQYPVRLNETTQKWELDREVGLRGGAAGKKISDEVRQEVIRLLN
EEDLSCGGIAKKLGISEGSVRRIAKQEKITSLAAASFKYVPISDGTRRDIVKLLKDGVSR
GQIAAQFGVSQTTVGRIAKEAGIASSAGAMSGRTVITPEIREKVIQMLKKDMSRREIARQ
LDISAGSVFKIAEKHKIPLTAAASLRTLKTSDGDRQTIIKLLEEGVLKREIAAQTGVSQA
TISTIAKQEGIVAAMPKGVTPEQIDQIFALKDQGKTNVHIADALKFSKSKVSDILVNYNP
ATYKRSWWNTTPENRTAAIQQLDEGKTSREIARDLKLPFETVRGIANEHRMARDSLAREL
LEQGKSAEEVAESLDMHPDYVRRLTDGIREGTHDSHFTSKDRDAAMDMFEKGYDKEEVAA
KLGISPWKARSLVNEFQTQTMDSVTPEQLDDIARILSNVDYCLTTGDLAKATDLPESTVA
LVEQQYAGGYIARSRFPQPGTSSDMSLGRGDHYEWIPPLSPEQEIEAVRAMNEGGSLKDV
AAQLNQPYAAIERLHEGDLPLVAPQDDVMDVPTAQLSHHGTTALSEADKAEIRNLAHRSG
VSASFIANLIDARVEDIQKILSSNP
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgacgatatccccggcaagcggttcgacctctcccgtgcgggaggatctatataaggcg
aacaaagacaccggtaagcccgagcccgccgcaaatgctttgccgaaccccgctgtcaca
ccacccgtcgcttcgcaggcagggtcgaagaagaacgatgcccccggccgtcgggcaggg
ccttccacatcagctgccttatcgtcgcgccagacctgcggcgaggcgctgccggtgcag
gtcggccatgcgactgcgagagccagagcgccggatgctttatcgagcgaaaaccgttct
gcgagggctgtgcctgcgcgcgccggtgccattgcggcaggggatctcaacggtttgaac
ggcaagtcttccgccggggccgcgaatgcgccgcaggtcacgcaacccacagatatgctg
cccgccgccagcaccgaagagttcaaggaactcaacaggaagtacgacacggtggatggc
tacgctcaccgcagcagcgagaccaactcccgaattgcgcaggaaatcgaagccggcatc
cagcaggaaatgaccggatatccgcctcaggtgatccggtttcaggaaaggcaaacgcat
ttgcaaggcatgctgtccgagcttccggatagcgagcggcaattctacggcggtgttctt
gccacagtgggcgcggcctaccagctcgaaaccgacggcgacaaacgctacgtactagac
cagaagctggccggtctggagcataccgttcgcgaggaagtcaaccgggctcgcaacgat
ccggtcgaccgggtgctaggccagttcaacccgcccatgggcgaagcctatctgaacaag
gaggaccgggaacgctcgggcagtctggacaaattgcgcgaacagtttctaggggcggcg
gatgccggcgaaagggagagcatattcgccgaagccagcgacctgaaaagcaaactgcaa
gggcgaatctccgtcgaagtcggcaaacgccagcgcgtggaacacgcgcagtggaaggag
gccaacggtgaagtggaccgcattctgcgggaagccgaggcgcagaccgatcccgcgagg
cgctacgaactgattggccgtcaactttttcagatcaacccgggcgaggacgcgttgaaa
gacaaagtcgttctggcctttacagaacgcatgcacgattcgccgccattgcgggacaaa
ctggatacctggcacgatcatgtcagcggcccactcaatgcgcaatccgtgggcgcggcc
aaaaaatatacggatattctcagcaacctgccgcccgtgagcgccgactacgtgcgtgat
ctcagcgaccggtacaacgccgtcctccaggacgtcacttataaagacgattccatcacc
cccgcggcgcgggcggaaaagacggccgggcaggtgctggaaggcgttgagcgcgtgctg
ctcggcctgacgcctttagctccgctggccgatctccaaccctccaccttgccggacaac
gtccgcatgggcctcgattatggatcggcgctcctcggcatgctgggtggggaaggctgg
ggtatcgccagagaaatcggtctcgcgggcaaagcggtctccgcggcagcacgggatgcc
gaggcggccaacctggctggagagggcggcgccactgccggcaaaggtctggttcagtca
gcgggtaaaggcgttctggagggcctgcaggcagaacagaccttgagtcgcgacgcgagg
gcagcggaacaggcgctgctggagaagaccctggccgaggctggtccagccgtggatccc
accagcctgctcgcgcaccagagcgtggcggacgggccccatggatcgctggtgaattac
gccgatcccgacgtatcgttgaaggatctccgtgcgggcccgacccgaggcatcctggtg
gatgccaaaggtgaccggtatatcgaacttggcggaaaggcttatcacgcccgttttgac
cgggatacagacagttggcgggtgtttaacaaaggggcggatttgaagccgcaatacccc
gtccgcctgaatgagacaacgcagaagtgggagcttgatcgtgaagtggggctgaggggc
ggagcggcaggaaaaaaaattagtgatgaagtccggcaggaagtcatcaggctattgaat
gaagaggacttgtcatgcggcggaatcgcaaagaaattgggaatatctgaagggtcggta
cgcagaattgccaaacaagaaaaaattacctcgcttgccgctgcttcttttaaatatgta
ccaatctcagacggaaccaggcgagatattgtcaagttgttgaaagacggcgtgtcacgt
gggcagatagccgcgcaatttggcgtatcccaaacgactgtcggcaggatcgccaaggaa
gccggtatcgcgtcatctgccggagctatgtctggtcgcactgtgattacgccggaaatc
cgcgagaaagtgattcaaatgctgaagaaagatatgtcgcgtcgagaaatagcgcggcaa
ttagatatatcggcaggttcggtattcaaaattgccgagaaacacaagatcccccttact
gccgccgcatctctgcgcaccctgaaaacttcggacggagatcgccagacaatcatcaaa
ctgctcgaggagggcgtgttgaaacgagaaatcgccgcgcagacgggcgtgtctcaagcg
acgatttcgacgatcgcgaagcaggagggaatcgttgctgccatgcccaagggcgtgacg
ccggagcagatcgaccagatatttgcactgaaagaccaggggaagaccaatgtccatatt
gccgacgcgctcaagttctcgaagagtaaagtcagcgacattctcgtcaattacaacccc
gctacttacaaaaggtcgtggtggaatacgacgccggaaaaccggacagcggcgattcag
caactggacgagggcaaaacttccagagaaattgcacgggatctgaaacttccatttgaa
accgtgcgggggattgccaacgaacaccggatggcaagagattcgttggcgagggagctt
ctggagcaaggaaagtccgccgaagaggtggccgagtcgctagacatgcatcccgactat
gtcaggcgtctgaccgacggtatacgcgaaggtacacatgacagccatttcacttcgaaa
gaccgggatgcggcaatggacatgttcgagaagggttatgacaaagaggaggttgccgcg
aaactcggcatttctccgtggaaggcccgtagccttgttaatgaattccagacgcaaacc
atggattcggtgacgccggagcaactggacgacatcgcacggatactcagcaatgtggac
tattgcctgacgaccggcgatctcgccaaggcgaccgacttgcccgaaagtacggttgcg
cttgtcgagcagcagtatgcgggtggctatatagctcgctcgcggtttccacaaccgggt
acgtcatccgatatgtcgctgggacgtggcgatcattacgagtggattccaccgctttct
ccagagcaggaaatcgaggcggttcgtgcaatgaatgaaggcgggagtcttaaggacgtt
gctgcgcaactcaatcaaccttacgcggcgatcgagcgtttgcacgagggggatttacca
ctcgtggcaccgcaggacgatgttatggacgtccccacagcgcaactgtctcatcatgga
acgactgcgctcagcgaggccgataaagctgaaatccgaaatctggcgcacagaagcggt
gtgagcgcgtcattcattgccaatctgattgatgcgcgagtggaagacattcaaaaaata
ctgagctcgaatccctga
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