KEGG   Parabacteroides sp. CT06: CI960_18605
Entry
CI960_18605       CDS       T05011                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
parc  Parabacteroides sp. CT06
Pathway
parc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:parc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CI960_18605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:parc03021]
    CI960_18605
Transcription machinery [BR:parc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CI960_18605
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 GerE UPF0122 Sigma70_ECF PCI HTH_24 Mga HTH_23 HTH_11 HTH_DeoR
Other DBs
NCBI-ProteinID: AST55209
UniProt: A0A223HS05
LinkDB
Position
complement(4190644..4191216)
AA seq 190 aa
MDVERIYLERLRSGSYRDFTKLYESYASRLYAFALHLTHSDALAKDIVQETFIKVWVRRE
QIDLDMSFSAFLFTMAKNQLLNEFRRQANSPLFLEDVVLNESGDGEETAIERKLSFEEFN
HRLEIAKQKLTPRQRELFELNKEQGITITEIAAKAFISEQSVRNQLSQALHVLRKELGKY
ALLFSLFFIG
NT seq 573 nt   +upstreamnt  +downstreamnt
atggatgtagaacggatatacctagaacgattacgaagcggttcatacagagactttacg
aaactgtatgaatcatacgcttcacgcctatatgcgttcgcattgcacttgactcattct
gatgctcttgcaaaagatattgtacaagagacttttatcaaagtgtgggtgcggagagaa
cagattgatttagatatgtctttcagtgctttcctatttacgatggccaagaaccaatta
ttgaatgagtttcgtaggcaggcaaatagtccactttttttggaagatgttgtactgaat
gagtctggagatggagaggaaacagcgattgaacgtaaattatcttttgaggaatttaac
catagactggaaatagcgaaacaaaagttgacacctcgccaacgagaactgtttgagtta
aataaggaacaaggtataactataacagaaatagcggctaaagcctttatttcagaacaa
tctgtgcgtaaccagttatcgcaagccttacatgttttaagaaaggagctcggtaagtat
gctttgctgttctctcttttctttatcggataa

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