Parabacteroides sp. CT06: CI960_18605
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Entry
CI960_18605 CDS
T05011
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
parc
Parabacteroides sp. CT06
Pathway
parc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CI960_18605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parc03021
]
CI960_18605
Transcription machinery [BR:
parc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CI960_18605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
GerE
UPF0122
Sigma70_ECF
PCI
HTH_24
Mga
HTH_23
HTH_11
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
AST55209
UniProt:
A0A223HS05
LinkDB
All DBs
Position
complement(4190644..4191216)
Genome browser
AA seq
190 aa
AA seq
DB search
MDVERIYLERLRSGSYRDFTKLYESYASRLYAFALHLTHSDALAKDIVQETFIKVWVRRE
QIDLDMSFSAFLFTMAKNQLLNEFRRQANSPLFLEDVVLNESGDGEETAIERKLSFEEFN
HRLEIAKQKLTPRQRELFELNKEQGITITEIAAKAFISEQSVRNQLSQALHVLRKELGKY
ALLFSLFFIG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagaacggatatacctagaacgattacgaagcggttcatacagagactttacg
aaactgtatgaatcatacgcttcacgcctatatgcgttcgcattgcacttgactcattct
gatgctcttgcaaaagatattgtacaagagacttttatcaaagtgtgggtgcggagagaa
cagattgatttagatatgtctttcagtgctttcctatttacgatggccaagaaccaatta
ttgaatgagtttcgtaggcaggcaaatagtccactttttttggaagatgttgtactgaat
gagtctggagatggagaggaaacagcgattgaacgtaaattatcttttgaggaatttaac
catagactggaaatagcgaaacaaaagttgacacctcgccaacgagaactgtttgagtta
aataaggaacaaggtataactataacagaaatagcggctaaagcctttatttcagaacaa
tctgtgcgtaaccagttatcgcaagccttacatgttttaagaaaggagctcggtaagtat
gctttgctgttctctcttttctttatcggataa
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