Pectobacterium aroidearum: I2D83_09045
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Entry
I2D83_09045 CDS
T07244
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pari03400
]
I2D83_09045
DNA repair and recombination proteins [BR:
pari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
I2D83_09045
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
zf-tcix
zinc_ribbon_2
AAA_22
AAA_16
SLFN-g3_helicase
DZR
MgtE_N
MciZ
AAA
UPF0547
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
QPI44691
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Position
complement(2002465..2004225)
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AA seq
586 aa
AA seq
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MSFTLRPYQREAVSATLDYFRRHTQPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYCAWGLDADIFAAGLQQRESQGKVVFGSVQSVARNLDQFDNAFSLLIIDECH
RISDDDNSQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGMIRGDERCLFRD
CIYELPLRYMIKHGFLVPPDRLDMPVVQYDFSKLAARSNGLFSEADLNLELKRQQRITPH
IISQVIDYAQTRRGAMIFASTVEHAKEITTLLPADQAALVSADTPAAERDALIDAFKQQS
LKYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLYPGKTDCLILDYAGNP
HDLYTPEVGNSKPHAGSQPVQVFCPVCGFANLFWGKTTPDGDVIEHYGRRCQGWEMAENG
QRQQCDFRFRFKVCPHCGAENDIAARRCHQCDEVLVDPDDMLKAALKLKDALVLRCSGMS
FEQGQDAKGEWLKIIYHDEDGADVSERFRLHSTAQRHVFLQQFLRVHQRAPGTPFNWQHA
ADVIAQQALLRAPDFVVARKHGKFWQIREKLFDYQGRFRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcacgctacggccttaccaacgtgaggctgtttccgccacactcgactatttt
cgtcgtcatacccagccggccgtcattgttttgcccaccggcgcggggaaaagtctggtt
atcgccgaactggcgcgactcgcacgcggccgcgtgctggtgctcgcgcacgttaaggag
ctggtcgcacaaaaccacgccaaatactgcgcctgggggcttgatgcggatatcttcgcc
gccgggctgcaacagcgagaaagtcagggaaaagtggtatttggcagtgtgcagtctgtc
gcacggaacctcgaccagttcgacaatgcgttctctctgttgatcattgacgaatgtcac
cgtattagcgacgacgataacagccaatatcaacaaatcatccagcatctgcaaaaaacc
aatccgcagctgcggttgctcggcttaaccgccacgccttatcggcttggcaaaggctgg
atatatcagtatcactatcacggcatgatacgtggtgatgagcgctgtttgttccgtgat
tgtatctatgaactgccgttgcgctatatgatcaaacatggctttctggtgccgcctgac
agactggatatgcccgtggtgcagtatgatttcagcaaactcgccgcccgcagcaacggg
ctattcagtgaggctgatctgaacctcgaactcaaacgtcagcaacgcattacgccgcac
atcatcagccaagtcatcgattatgcgcaaacacggcgcggggcgatgatttttgcgtcc
accgtcgaacacgccaaagaaattacgaccttgttaccggctgaccaggcggcgttggtc
agcgccgatacaccagcagccgagcgcgatgcgctgattgacgcctttaaacagcagtcg
ctgaaatatctggtcaacgtggcggtgctgacaacgggttttgatgctccacatgtcgat
cttatcgctatccttcgcccaacagaatccgtcagcctgtaccagcaaatcgtcggacgt
ggtttacgcttatatccgggaaaaacggactgtctgattctggattacgcgggcaatcca
cacgatctctatacgccagaagtcggcaacagcaagccgcatgccggtagccaaccggtg
caggtcttctgccccgtatgcggctttgccaacctgttttggggaaaaaccactccagac
ggcgacgtcatcgaacactatggtcgccgctgccagggttgggaaatggcggaaaatggc
caacgccaacagtgtgatttccggtttcggtttaaagtctgtccgcactgcggcgcggaa
aacgatatcgcggcgcggcgctgccaccagtgtgatgaggtgttggtcgatcccgacgat
atgctgaaagcagcgctgaagctgaaagatgcactggttttacgctgtagtggcatgagc
ttcgagcaagggcaggatgcgaaaggggaatggctgaaaatcatctaccacgatgaagac
ggggccgacgtgagcgaacgttttcgcctgcactccaccgcgcaacgccatgttttcctg
caacagtttttacgcgttcatcagcgagcaccgggaacgccgtttaactggcagcatgcc
gccgacgttatcgcgcagcaggccttacttcgcgccccagactttgttgtcgcccgcaaa
cacggaaaattctggcaaatccgtgaaaagctctttgattatcagggacgatttcgtcgc
gccaatgagctccgcggctaa
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