Pectobacterium aroidearum: I2D83_18620
Help
Entry
I2D83_18620 CDS
T07244
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pari
Pectobacterium aroidearum
Pathway
pari02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I2D83_18620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pari03021
]
I2D83_18620
Transcription machinery [BR:
pari03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I2D83_18620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
GerE
HTH_28
Phage_terminase
HTH_Tnp_ISL3
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QPI42421
LinkDB
All DBs
Position
4176739..4177281
Genome browser
AA seq
180 aa
AA seq
DB search
MSSANIDTSADMHQLYCQHHGWLQGLLRKRLGNLCDAADLAQDVFVRLLLKPRQFDSHAG
ARAYLSVMAQGMCVDLWRKREIERVWLASLAEQPEPVALSAEDSNIILETLYQVDAMLRA
LPEKVRAAFIMAQVQGRPYRDIADALGVSERMVKKYMAQAMLHCVLLEAEIDADGQDARS
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagccaatattgatacctcagcagatatgcatcagctctattgccagcatcat
ggctggttgcaggggctattacgcaaacggctggggaatctgtgtgatgcggccgatctg
gcgcaggatgtctttgtacggctcttgctgaagccacgtcagttcgacagccacgcgggt
gcgcgggcttatctgagcgtgatggcgcaaggcatgtgcgtcgatctctggcgcaagcgg
gaaatcgagcgcgtctggctcgcctcgctcgccgaacagccggagccggttgccctgtca
gcggaagacagcaatatcattctcgaaaccctgtatcaggtcgatgccatgttgcgtgcg
ctgcccgagaaggtgcgtgccgcttttatcatggcgcaggtacagggacgcccctatcgg
gacattgccgatgcgctgggcgtttccgaacgcatggtgaaaaaatacatggcgcaagcc
atgctgcattgtgtgctgctggaagcggagatagacgcggacggtcaggacgctcgttca
tga
DBGET
integrated database retrieval system
