Pyrobaculum arsenaticum: Pars_1378
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Entry
Pars_1378 CDS
T00503
Name
(GenBank) rRNA biogenesis protein Nop56/Nop58
KO
K14564
nucleolar protein 56
Organism
pas
Pyrobaculum arsenaticum
Brite
KEGG Orthology (KO) [BR:
pas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pas03009
]
Pars_1378
Ribosome biogenesis [BR:
pas03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
Pars_1378
Prokaryotic type
Pars_1378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Nop5_56-rel_N_Arc
Motif
Other DBs
NCBI-ProteinID:
ABP50940
UniProt:
A4WKM3
LinkDB
All DBs
Position
complement(1239486..1240754)
Genome browser
AA seq
422 aa
AA seq
DB search
MAKIHIATDVLGFFAVDEGGNLVDKELFEKKPELIAERLIELEKSNPVPELVKLVERLRG
RAEKIVLEDPELARKLVSTVKWAEVVGESPSPVLVAFRQNFQRHLSSIGLSWEEYTKFLF
EISDLVTRLKLRQAVAKRDLYIAQAISALDDVDKIMNLIASRIREWYGLHFPELEELVRD
NKEYVSIVYHIGHRSKITEDALKKVAPEAPEDRVKKIVEAAKRSVGAEMSDWDLDQLKTY
ADVFLKLNAYRDQLAAYIDEAMKEVAPNIRELVGPLLGARLIKLAGGLTRMAFLPASTIQ
VLGAEKALFRALRTGGKPPKHGVIFQYPDIFRSPRWQRGKIARALAAKLAIAAKADAFTG
NFIAPRLKEELLKRIQEIKTLYAKPPPKAPAQPSAKTPPPPPPSPPRGGERRPPPRRERG
RR
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaatacatatcgcaacggacgttctcggcttcttcgcggtggacgaggggggc
aacctcgtagacaaggaactattcgagaagaagcctgaacttattgcggagaggcttatc
gagctggagaaatccaacccggtgccggagcttgtgaagcttgtggagaggctaaggggc
agggcggagaagattgtgctagaagacccggagctggcgcggaagcttgtatccacggtg
aagtgggccgaggtggtgggcgagagcccctcccccgtattggtggcgtttaggcagaat
ttccagaggcatctctccagcattggcctgagctgggaggagtacacaaagttcctcttc
gagataagcgatctggtaacgaggttaaagctgaggcaggctgtggccaagcgcgacttg
tacatcgcccaggccataagcgcgcttgacgacgtggacaagatcatgaacctaatcgcg
tcgaggataagggagtggtacggcctccacttccccgaacttgaggagttggtgagagac
aacaaggagtacgtctctatcgtataccacataggccataggtctaagattacggaagac
gccttgaagaaggtggcccccgaggcgccggaggacagagtcaagaagatagtggaggcg
gcgaagaggagcgtcggcgcagagatgtcagactgggatctcgaccagctcaagacgtat
gctgacgtattcctgaagctcaacgcttacagagaccagctggctgcgtacatcgacgag
gccatgaaggaggtggcccccaacatcagggagctggtggggcctctgctgggcgcgagg
ctgataaagctcgccggcggcttgacgaggatggcgtttctccccgcctcgacgatacag
gtcctcggcgcagagaaggcgctgttcagggcgttgaggacaggaggaaagcctccaaaa
cacggcgtcatattccagtatccggacatcttccgctctccccgctggcagagggggaaa
atcgccagggcccttgcggctaagctggcgattgctgccaaggcagatgccttcactggg
aatttcatagcgccgaggctaaaagaggagttgttgaagcgtatacaggaaataaagacg
ttatatgcaaagccgcctcccaaagcccccgcacagccaagcgccaagacgccgcctcct
ccaccgccgtcaccgccaagagggggcgagaggaggcctcctccgaggagggaaagggga
aggaggtaa
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