Pseudomonas asiatica: LG197_12505
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Entry
LG197_12505 CDS
T08841
Name
(GenBank) IS3 family transposase
Organism
pasi
Pseudomonas asiatica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
rve_2
HTH_21
rve_3
HTH_28
HTH_Tnp_1
DDE_Tnp_IS240
HTH_Tnp_ISL3
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
WDM90836
LinkDB
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Position
complement(join(2738864..2739738,2739738..2740215))
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AA seq
450 aa
AA seq
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MGKYTEQFKLTAITAYLEGSRGFRKVAQHFGIDFSLLRRWVAGYQVDASLGPRSHGRRYT
EEFKRRVLKYMLEHRLSLRQTAAHFDLGQSSQIGIWLRQHYSGSPEATLAKQRKSAVPKK
IKPIKPTDTNDAEKSREQLLSELEYLRMENDVLKELKALPRGEGANTDEKALIVCKFRHK
YPLPDLLQMVGLARSTFYYQIKCQQKPDRHASLKELVQRVYHEEKGLYGYRRIALAIRNQ
GTLVNKKVIERLMAELGLQSVVRPKKYRSYRGIVGKVAMNLLERNFVAQRPNQKWVTDVT
EFKVAQQKLYLSPVMDLYNGEIIAYETACRPTYGLVGNMLEKALDGLGEKPKLVIHSDQG
WHYQQPQYRHKLAARGVKQSMSRKGNCLDNAAMESFFGTLKSEFFYLKRFESVEQLKAGL
EEYIHYYNHDRIRLKLNGLSPVSYRTQATG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatacacagagcagttcaagctcacggctatcaccgcttacctagagggcagc
cggggctttcgcaaggtggcacaacactttggcatcgatttcagcctgcttcggcgctgg
gttgctggctaccaagtcgatgccagcctcggccctcgctcgcatggtcgccgctacacc
gaggaattcaagcggcgggtgctcaagtacatgcttgagcatcgcctgtccctgcgccaa
acagcggcgcactttgaccttggacagtcctcacagataggcatttggctgcggcagcac
tacagtggcagtcctgaagccactctcgccaaacaaagaaaatcagccgtgccgaagaaa
attaagcccatcaagccgacagataccaatgacgcagagaaatctcgtgagcagttgttg
agcgagctcgagtatctgcgcatggagaatgatgtcctaaaggagttaaaggctctgccg
agaggagaaggagcgaacacggacgaaaaagccctgatcgtctgtaaattcagacataaa
tatccgctgcctgatctcttgcagatggtggggttggcacgcagtaccttttattaccag
atcaagtgccagcaaaagccggacaggcacgcctcgctcaaggagttggtgcagcgtgtc
tatcacgaggagaaagggctgtatggctaccgccgcattgcccttgccatcaggaatcag
gggaccttggtcaacaagaaggtcattgaacggttgatggctgagcttggtttgcagtcc
gttgtacgcccgaagaagtatcgatcctatcgcggcattgtcggcaaggtggcaatgaat
ttgctggagcgtaatttcgtcgcgcaacgccccaaccagaagtgggtgaccgatgtcact
gagttcaaagtggcccaacaaaagctctacctgtcgcccgtgatggacttgtacaacggt
gagatcatcgcctatgaaacagcttgccggcctacttatggcttggtcgggaacatgctg
gaaaaggcgctcgatgggttgggtgaaaagcccaagctagtgatccactcagaccaagga
tggcattaccagcagccccaataccgccataagctcgcagcgcgcggtgtgaagcagagc
atgtctcgcaagggcaattgtctggataatgcagcgatggaaagcttcttcggcacactg
aagtcagagttcttctacctgaagcgctttgaaagcgtcgaacagctgaaggcgggcctg
gaggagtacatccattactacaaccatgaccgcatcaggctgaaactcaatggcctgagc
cctgtcagctacaggactcaggccactggctaa
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