Paraglaciecola sp. T6c: Patl_4282
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Entry
Patl_4282 CDS
T00372
Name
(GenBank) RNAse PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pat03016
]
Patl_4282
Enzymes [BR:
pat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
Patl_4282
Transfer RNA biogenesis [BR:
pat03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Patl_4282
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF6629
Motif
Other DBs
NCBI-ProteinID:
ABG42781
UniProt:
Q15MV7
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All DBs
Position
complement(5151224..5151937)
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AA seq
237 aa
AA seq
DB search
MRPNDRTASQIRPVTITRNFTCHAEGSVLIEFGNTKVLCNASVTEGVPRFMKGQGKGWVN
AEYSMLPRATHTRSDREAARGKQGGRTLEIQRLIARSLRAALDLKLLGENTIVVDCDVIQ
ADGGTRTASITGACVALVDALTWMRSKGIIKTNPMKHMIAAISVGIYKGNAIADLEYTED
SEAETDMNVVMTDTGKMIEVQGTAEGEPFSIEEMHEMLELAKHGIRELFDEQKAALN
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgaacgacagaaccgcaagccaaattcgcccagttactattacccgtaatttc
acttgtcatgcagaaggttctgtattgattgagttcggcaacacgaaagtattgtgcaac
gcctctgtgactgaaggtgtgccccgtttcatgaaaggccaaggtaaaggctgggtgaat
gctgagtacagtatgttgccacgtgcgacccatactcgttcagatcgtgaagcggctcgt
ggtaaacaaggtggtaggacattggaaattcagcggttaatcgctcgttcgttacgtgcc
gcgcttgatttaaaactgcttggcgaaaacaccatagttgtagattgtgatgtcattcag
gctgatggcggtacacgcactgcatccatcactggcgcgtgtgtggcacttgttgatgcg
cttacatggatgcgcagcaaagggatcatcaaaaccaaccctatgaagcacatgatcgcg
gcgatttctgtgggtatatacaagggcaatgcgattgctgacttggaatacacagaggac
tcagaagcagaaaccgatatgaatgtggtgatgaccgatacgggtaaaatgatcgaagta
caaggtactgctgaaggcgaaccttttagtattgaagaaatgcatgaaatgctagagctg
gcaaaacacggtatccgtgaattgttcgacgagcaaaaagctgcacttaactaa
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