Pseudomonas atacamensis: JWU58_08175
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Entry
JWU58_08175 CDS
T07336
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata03030
DNA replication
pata03430
Mismatch repair
pata03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JWU58_08175
03430 Mismatch repair
JWU58_08175
03440 Homologous recombination
JWU58_08175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pata03032
]
JWU58_08175
03400 DNA repair and recombination proteins [BR:
pata03400
]
JWU58_08175
Enzymes [BR:
pata01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JWU58_08175
DNA replication proteins [BR:
pata03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JWU58_08175
DNA repair and recombination proteins [BR:
pata03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JWU58_08175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_16
AAA_5
Mg_chelatase
nSTAND3
AAA_22
TsaE
Motif
Other DBs
NCBI-ProteinID:
QSL89251
LinkDB
All DBs
Position
1781354..1782337
Genome browser
AA seq
327 aa
AA seq
DB search
MAEAYPWQDSLWQQLAGRSQHAHAYLLHGPAGIGKRALAERLMASLLCQRPTPEACGECK
SCLLLKAGSHPDNYILEPEEADKAIKVDQVRDLVSFVVQTAQLGGRKVVLIEPVESMNIN
AANALLKSLEEPSGDTVLLLVSHQPSRLLPTIKSRCVQQACPLPGEAMSLQWLAQALPDC
AEDERVELLTLAAGSPLMAVSLQSQGVREQRAQVVEGVKKLLKGQQSPTQLAEEWKSIPM
LRLFDWFCDWSSLILRYQLTQDEAGLGLADMRKVVQYLAQKSAQGKVLDIQDWILAQRQK
VLSKANLNPALLLEALLVQWVGLPGQR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaggcctatccatggcaggacagcctctggcagcaactggccggacgcagtcag
catgcccacgcgtacctgctgcacggtcccgccggtatcggcaagcgtgctctggccgaa
cgcttgatggccagcctgctttgtcagcgccctacgcctgaggcatgcggcgagtgcaaa
tcctgtctgctgctcaaggccggcagtcatccggacaattacatcctggagccggaagag
gcggacaaggcgatcaaggtcgatcaggttcgtgatctggtcagtttcgtcgtgcagact
gcgcagctcggcgggcgcaaagtggtgttgatcgagccggtcgagtcgatgaatatcaac
gctgccaacgccttgctcaaaagccttgaagagccgtccggcgataccgtgctgctattg
gtcagccaccagcccagccgtttattgccaaccatcaagagccgttgcgtgcagcaggcc
tgcccgctgccgggcgaggcgatgagcctgcaatggctggcccaggcgctaccggattgc
gcggaagacgaacgcgtcgaactgctgacgctcgccgccgggtcgccgctgatggcggtc
agcctgcaatcgcaaggtgtgcgtgaacagcgcgcgcaagtggtcgaaggcgtgaagaag
ttgctcaagggccagcaatcgccgacgcaactggcggaagagtggaaaagcattccgatg
ctgcgtctgttcgactggttctgcgactggtcgagcctgatcctgcgctatcaactgact
caggacgaggccggcctcggcctggccgatatgcgcaaggtcgtgcagtacctggcccaa
aagagcgcgcagggcaaagtgctggatattcaggactggattctcgcccaacggcagaaa
gtgttgagcaaggccaacctcaatccggccctgttgctggaagcattgttggtgcaatgg
gtgggattgcctggtcaaagataa
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