Pseudomonas atacamensis: JWU58_21160
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Entry
JWU58_21160 CDS
T07336
Symbol
emhB
Name
(GenBank) efflux RND transporter permease subunit EmhB
KO
K18138
multidrug efflux pump
Organism
pata
Pseudomonas atacamensis
Pathway
pata01501
beta-Lactam resistance
pata01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWU58_21160 (emhB)
01503 Cationic antimicrobial peptide (CAMP) resistance
JWU58_21160 (emhB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pata02000
]
JWU58_21160 (emhB)
01504 Antimicrobial resistance genes [BR:
pata01504
]
JWU58_21160 (emhB)
Transporters [BR:
pata02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JWU58_21160 (emhB)
Antimicrobial resistance genes [BR:
pata01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JWU58_21160 (emhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
QSL86661
LinkDB
All DBs
Position
4634480..4637644
Genome browser
AA seq
1054 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIQVTYPGASAQTVQDT
VVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNSDTAQVQVQNKLNLATPLLPQ
EVQQQGIRVTKAVKNFLLVIGVVSRDGSMTKDDLSNYIVSNMQDPISRTAGVGDFQVFGA
QYAMRIWLDPAKLNNFNLTPVDVKNAIAAQNVQVSSGQLGGLPAVQGQQLNATIIGKTRL
QTAEQFKEILLKVNKDGSQVRLKDVAEVGLGGENYAISAQFNGSPASGLAVKLANGANAL
DTAKALRNTIDSLKPFFPQGMEVVFPYDTTPVVTESIKGVVHTLVEAIALVFLVMFLFLQ
NFRATVITTMTVPVVLLGTFGILAAAGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
SEEGLSPKEATKKSMGQIQGALVGIALVLSAVLLPMAFFSGSTGVIYKQFSITIVSAMAL
SVLVALIFTPALCATMLKPIPKGEHGTPKKGFFGWFNRNFDRGVRSYERGVGNMLTRKAP
YLLAYLLIVVGMIWLFTRIPTAFLPEEDQGVLFAQVQTPAGSSAQRTQVVVDEMREYLLR
PNKDGGEADAVASVFTVTGFNFAGRGQSSGMAFIMLKPWGERNADNSVFNLAARAQQHFF
SFRDAMVFAFAPPAVLELGNATGFDVFLQDRAGIGHEKLMEARNQFLGMAAQSKVLTQVR
PNGLNDEPQFQLEIDDEKASALGITISDINNTLSIALGSSYVNDFIDRGRVKKVYVQGQP
DSRMSPEDLKKWYVRNAEGTMVPFSAFAKGEWVYGSPKLARYNGVEAVEVLGAPAPGYST
GEAMAEVEAIAKKLPSGVGISWTGLSYEERLSGSQAPALYALSLLMVFLCLAALYESWSI
PIAVMLVVPLGIIGALMATSLRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKELHEQGR
SLREAAIEACRMRLRPIIMTSLAFVLGVVPLAISTGAGSGSQHAIGTGVIGGMLTATILA
IFWVPLFFVTVSSIGQRKKTDADDTTETPKEAGQ
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaattcttcatcgaccgtccgattttcgcctgggtaatcgccctggtgatcatg
ctggtcggggcactttcgatcctgaaattgccgatcaaccaatacccgagcattgcgcca
ccggccattgcgatccaggtgacctacccaggcgcgtccgcacaaaccgtgcaggacacc
gtggtgcaggtcatcgagcaacagctcaacggtatcgacaacctgcgttatgtgtcttcg
gaaagtaactccgacggcagcatgaccatcaccgcgaccttcgagcaaggcaccaactcc
gacaccgcgcaggtccaggtccagaacaagctgaacctggctaccccgctgctgccgcag
gaagtgcagcaacagggtatccgcgtgaccaaggcagtgaagaacttcctgctggtgatc
ggcgtggtgtcgcgtgacggcagcatgaccaaggacgacctgtccaactacatcgtgtcg
aacatgcaggacccgatctcgcggaccgccggtgtcggtgacttccaggtcttcggtgcg
cagtacgcgatgcgtatctggctcgacccggccaagttgaacaacttcaacctgaccccg
gtcgacgtgaagaacgccattgctgcgcagaacgtccaggtgtcgtccggtcagctcggt
ggcttgcctgccgtgcagggccagcaactgaacgcgacgatcatcggcaagacccgtctg
cagaccgccgagcagttcaaggaaatcctgctcaaggtcaacaaggacggttcgcaggtt
cgcctcaaagacgtggctgaagtcggcctcggcggtgagaactacgcgatcagtgcccag
ttcaacggcagcccggcttccggtctggcggtgaaactggccaacggcgccaacgccctc
gataccgccaaagcgctgcgcaacaccatcgacagcctcaagccgttcttcccgcaaggc
atggaagtggtgttcccgtatgacaccaccccggtggtgaccgagtcgatcaaaggcgtg
gtgcacaccctggtcgaagcgatcgcgctggtgttcctggtgatgttcctgttcctgcag
aacttccgcgccaccgtcatcaccacgatgactgtgccggtggtactgctcggtacattc
ggcatcctcgccgccgccggtttcagcatcaacaccctgaccatgttcggcatggtgctg
gccatcggtctgctggtggacgatgccatcgtcgtggtggaaaacgtcgagcgggtgatg
agcgaagaaggcttgtcaccgaaggaagcgacaaagaaatccatgggccagatccagggt
gcactggtcggtatcgcccttgtgctctcggcggtactgctgccgatggcgttcttcagc
ggctccacgggtgtgatctacaagcagttctcgatcaccatcgtgtcggccatggccctg
tcggtactggttgccctgatcttcaccccggcgctgtgcgcaaccatgctcaagccgatt
ccgaaaggcgagcacggtactccgaagaaaggtttcttcggctggttcaaccgcaacttc
gaccgtggcgtacgcagctacgagcgtggcgtcggcaatatgctgacccgcaaggcgccg
tatctgctggcgtacctgttgatcgtcgtgggcatgatctggctgttcacccgcattccg
accgcgttcctcccggaagaagaccagggcgttctgttcgctcaggtgcagaccccggcc
ggttccagtgcccagcgcacgcaggtggtggtggatgaaatgcgtgagtacctgctgcgt
ccgaacaaggacggcggtgaggcggacgcggtggcttcggtgtttaccgtgaccggcttc
aacttcgccggccgtggccagagctcgggtatggcgttcatcatgctcaagccgtggggc
gaacgtaacgccgacaacagcgtgttcaacctcgctgcgcgtgcccagcaacacttcttc
agtttccgcgacgcgatggtgtttgccttcgccccgccagcggttctggaattgggtaac
gccaccggtttcgacgtgttcctgcaggaccgcgccggtatcggtcacgaaaaactgatg
gaagcgcgcaaccagttcctcggcatggcggcgcaaagcaaggtgctgacccaggtgcgt
ccgaacggcctgaacgacgagccgcagttccagctggaaatcgacgacgagaaggccagt
gccctcggcatcaccatcagcgacatcaacaacaccctgtcgatcgcgctgggcagtagc
tacgtcaacgacttcatcgaccgtggtcgggtgaagaaagtctacgtgcagggccaaccg
gactcgcgcatgagccccgaagacctgaagaagtggtacgtgcgcaacgccgaaggcacc
atggttccgttctcggcgttcgccaagggcgagtgggtctacggttcgccgaagctggcg
cgctacaacggtgtggaagcggtcgaggtcctcggggctccggcgccgggctactccacc
ggtgaagcgatggctgaagtcgaagcgattgccaagaagctgccgtccggtgtcggtatc
tcctggaccggtctgtcctacgaggaacgtctgtccggctcgcaagcgccagcgctgtac
gccctgtcgctgctgatggtgttcctgtgtctggcggcgctgtatgaaagctggtcgatt
ccgatcgcggtcatgctcgtggtaccgctggggatcatcggtgcactgatggccaccagc
ctgcgcggtctgtccaacgacgtgtacttccaggtgggcttgttgacgaccatcggtctg
gcggctaaaaacgccattctgatcgtcgaattcgccaaggaactgcatgaacagggacgc
agcctgcgtgaagcggcgattgaagcctgccgcatgcgtctgcgcccgatcatcatgacc
tcgctggccttcgttctcggtgttgtgccgctggcgatttccaccggcgccggttcaggc
agtcagcacgcgatcggtaccggcgtgattggcggtatgctcacggccacgatcctggcg
atcttctgggtcccactgttcttcgttactgtgtcgtccatcggtcagcgcaaaaagacc
gacgcggatgacactactgaaactcctaaagaggctggccaatga
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