Pseudomonas atacamensis: JWU58_25960
Help
Entry
JWU58_25960 CDS
T07336
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00521
Streptomycin biosynthesis
pata00523
Polyketide sugar unit biosynthesis
pata00541
O-Antigen nucleotide sugar biosynthesis
pata01100
Metabolic pathways
pata01110
Biosynthesis of secondary metabolites
pata01250
Biosynthesis of nucleotide sugars
Module
pata_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JWU58_25960 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JWU58_25960 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JWU58_25960 (rfbC)
Enzymes [BR:
pata01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JWU58_25960 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QSL87573
LinkDB
All DBs
Position
5737312..5737857
Genome browser
AA seq
181 aa
AA seq
DB search
MNVITTDLPGVLIIEPKVFGDERGFFYESFNAKAFQDATGLETQFVQDNHSRSQKGVLRG
LHYQLQNTQGKLVRVTAGEVLDVAVDIRRSSPHFGKSVAVRLSAENHRQLWVPEGFAHGF
VVLSEFAEFLYKTTNYYDPSSERSIRWDDPALGIDWQLDEAPKLSAKDQAAALLKDADVF
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcatcaccaccgatctgcccggtgttctgatcatcgaacccaaggtgttcggc
gacgagcgcggttttttctacgagagtttcaatgccaaggcgtttcaggacgctaccggt
ctggaaacgcagtttgtgcaggacaaccattcgcgctcgcaaaaaggcgtgctgcgtggt
ctgcattaccagttgcagaacacccagggcaaactggttcgcgtgaccgcgggtgaagtg
ctcgatgtggcggtggacatccgtcgcagctcgccgcatttcggcaaatcggtggcggtg
cgcctgtcggcggaaaaccatcgtcagctatgggtaccggaaggtttcgctcacggtttc
gtggtgctgagcgagttcgccgaattcctctacaagaccaccaactattacgacccgtct
tccgagcgcagcattcgctgggacgacccggcgctgggcatcgactggcaactggacgaa
gcgccgaagctgtcggccaaggaccaggcggccgcgctgctcaaggacgctgacgtcttc
gcctga
DBGET
integrated database retrieval system