KEGG   PATHWAY: acun03060
Entry
acun03060                   Pathway                                
Name
Protein export - Athene cunicularia (burrowing owl)
Description
The protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the general protein export system that transports newly synthesized proteins into or across the cell membrane. The translocation channel is formed from a conserved trimeric membrane protein complex, called the Sec61/SecY complex. The twin-arginine translocation (Tat) pathway is another protein transport system that transports folded proteins in bacteria, archaea, and chloroplasts. Many Tat systems comprise three functionally different membrane proteins, TatA, TatB, and TatC, but TatA and TatE seem to have overlapping functions, with TatA having by far the more important role.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
acun03060  Protein export
acun03060

Other DBs
GO: 0043952 0043953
Organism
Athene cunicularia (burrowing owl) [GN:acun]
Gene
113480346  SRP54; signal recognition particle 54 kDa protein [KO:K03106] [EC:3.6.5.4]
113484941  SEC61A1; protein transport protein Sec61 subunit alpha [KO:K10956]
113491257  SEC61A2; protein transport protein Sec61 subunit alpha [KO:K10956]
113477560  SEC61G; protein transport protein Sec61 subunit gamma [KO:K07342]
113483375  SEC62; translocation protein SEC62 [KO:K12275]
113478195  SEC63; translocation protein SEC63 homolog [KO:K09540]
113486422  HSPA5; endoplasmic reticulum chaperone BiP [KO:K09490] [EC:3.6.4.10]
113477959  SRP9; signal recognition particle 9 kDa protein [KO:K03109]
113480492  SRP14; signal recognition particle 14 kDa protein [KO:K03104]
113479449  SRP72; signal recognition particle subunit SRP72 [KO:K03108]
113486855  SRP68; signal recognition particle subunit SRP68 [KO:K03107]
113489557  SRP19; signal recognition particle 19 kDa protein [KO:K03105]
113488428  SRPRA; signal recognition particle receptor subunit alpha [KO:K13431]
113483660  SRPRB; signal recognition particle receptor subunit beta [KO:K12272]
113485674  GET4; Golgi to ER traffic protein 4 homolog [KO:K23387]
113489334  SGTA; small glutamine-rich tetratricopeptide repeat-containing protein alpha [KO:K16365]
113476795  WRB; tail-anchored protein insertion receptor WRB isoform X1 [KO:K22384]
113484240  TMEM208; transmembrane protein 208 [KO:K27164]
113485041  SPCS1; signal peptidase complex subunit 1 isoform X1 [KO:K12946] [EC:3.4.-.-]
113480613  SPCS2; signal peptidase complex subunit 2 [KO:K12947] [EC:3.4.-.-]
113479396  SPCS3; signal peptidase complex subunit 3 [KO:K12948] [EC:3.4.-.-]
113483777  SEC11A; signal peptidase complex catalytic subunit SEC11A isoform X1 [KO:K13280] [EC:3.4.21.89]
113489872  SEC11C; signal peptidase complex catalytic subunit SEC11C [KO:K13280] [EC:3.4.21.89]
113481377  IMMP1L; mitochondrial inner membrane protease subunit 1 [KO:K09647] [EC:3.4.21.-]
113491278  IMMP2L; mitochondrial inner membrane protease subunit 2 isoform X1 [KO:K09648] [EC:3.4.21.-]
Reference
  Authors
Dalbey RE, Robinson C.
  Title
Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane.
  Journal
Trends Biochem Sci 24:17-22 (1999)
DOI:10.1016/S0968-0004(98)01333-4
Reference
  Authors
Berks BC, Sargent F, Palmer T.
  Title
The Tat protein export pathway.
  Journal
Mol Microbiol 35:260-74 (2000)
DOI:10.1046/j.1365-2958.2000.01719.x
Reference
  Authors
Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T.
  Title
TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export.
  Journal
J Biol Chem 275:16717-22 (2000)
DOI:10.1074/jbc.M000800200
Reference
  Authors
Jongbloed JD, Martin U, Antelmann H, Hecker M, Tjalsma H, Venema G, Bron S, van Dijl JM, Muller J.
  Title
TatC is a specificity determinant for protein secretion via the twin-arginine translocation pathway.
  Journal
J Biol Chem 275:41350-7 (2000)
DOI:10.1074/jbc.M004887200
Reference
  Authors
Rapoport TA
  Title
Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes.
  Journal
Nature 450:663-9 (2007)
DOI:10.1038/nature06384
Reference
  Authors
Flower AM
  Title
The SecY translocation complex: convergence of genetics and structure.
  Journal
Trends Microbiol 15:203-10 (2007)
DOI:10.1016/j.tim.2007.03.001
Reference
  Authors
Osborne AR, Rapoport TA, van den Berg B
  Title
Protein translocation by the Sec61/SecY channel.
  Journal
Annu Rev Cell Dev Biol 21:529-50 (2005)
DOI:10.1146/annurev.cellbio.21.012704.133214
Reference
  Authors
Paetzel M, Karla A, Strynadka NC, Dalbey RE
  Title
Signal peptidases.
  Journal
Chem Rev 102:4549-80 (2002)
DOI:10.1021/cr010166y
Reference
  Authors
Paetzel M, Dalbey RE, Strynadka NC
  Title
The structure and mechanism of bacterial type I signal peptidases. A novel antibiotic target.
  Journal
Pharmacol Ther 87:27-49 (2000)
DOI:10.1016/S0163-7258(00)00064-4
Reference
  Authors
Ng SY, Chaban B, VanDyke DJ, Jarrell KF
  Title
Archaeal signal peptidases.
  Journal
Microbiology 153:305-14 (2007)
DOI:10.1099/mic.0.2006/003087-0
Reference
  Authors
Desvaux M, Hebraud M, Talon R, Henderson IR
  Title
Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue.
  Journal
Trends Microbiol 17:139-45 (2009)
DOI:10.1016/j.tim.2009.01.004
Reference
  Authors
Nakatogawa H, Murakami A, Ito K
  Title
Control of SecA and SecM translation by protein secretion.
  Journal
Curr Opin Microbiol 7:145-50 (2004)
DOI:10.1016/j.mib.2004.01.001
KO pathway
ko03060   
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