KEGG   PATHWAY: adi02010
Entry
adi02010                    Pathway                                
Name
ABC transporters - Alloalcanivorax dieselolei
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
adi02010  ABC transporters
adi02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Alloalcanivorax dieselolei [GN:adi]
Gene
B5T_01103  cysP; Sulfate ABC transporter, sulfate-binding protein [KO:K02048]
B5T_01102  Sulfate ABC transporter, permease protein CysT [KO:K02046]
B5T_01101  cysW; Sulfate ABC transporter, permease protein CysW [KO:K02047]
B5T_01100  Sulfate ABC transporter, ATPase subunit [KO:K02045] [EC:7.3.2.3]
B5T_01563  nrtC; Nitrate transport ATP-binding protein [KO:K15576]
B5T_01564  nrtB; ABC transporter, permease protein [KO:K15577]
B5T_01565  nasD; Nitrate transporter ATPase component NasD [KO:K15578] [EC:7.3.2.4]
B5T_04125  ABC transporter sulfonate/nitrate transport system substrate-binding protein [KO:K15553]
B5T_04126  Nitrate ABC transporter, permease protein, putative [KO:K15554]
B5T_04127  ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component [KO:K15555] [EC:7.6.2.14]
B5T_02429  Molybdate ABC transporter, periplasmic molybdate-binding protein [KO:K02020]
B5T_02428  modB; Molybdate ABC transporter permease protein [KO:K02018]
B5T_02427  modC; Molybdate ABC transporter, ATPase subunit [KO:K02017] [EC:7.3.2.5]
B5T_00288  Iron ABC transporter periplasmic binding protein [KO:K02012]
B5T_00289  ABC transporter, permease protein [KO:K02011]
B5T_03271  ABC transporter-like protein [KO:K02010] [EC:7.2.2.7]
B5T_03570  Toluene tolerance protein Ttg2D [KO:K07323]
B5T_00744  Twin-arginine translocation pathway signal [KO:K07335]
B5T_00745  ABC transporter, permease protein [KO:K23535]
B5T_00746  ABC transporter, permease protein [KO:K23536]
B5T_00749  ABC-type uncharacterized transport system, ATPase component protein [KO:K23537]
B5T_04368  pstS; Phosphate ABC transporter, periplasmic binding protein-like protein [KO:K02040]
B5T_04367  pstC; Phosphate ABC transporter, permease protein PstC, putative [KO:K02037]
B5T_04366  pstA; Phosphate ABC transporter permease protein [KO:K02038]
B5T_04365  pstB; Phosphate ABC transporter, ATPase subunit [KO:K02036] [EC:7.3.2.1]
B5T_02563  amiC; Aliphatic amidase expression-regulating protein [KO:K01999]
B5T_01887  branched-chain amino acid ABC transporter [KO:K01999]
B5T_02164  ABC-transporter [KO:K01999]
B5T_03300  ABC transporter, periplasmic branched chain amino acid binding protein [KO:K01999]
B5T_01157  ABC-type branched-chain amino acid transport systems periplasmic component-like protein [KO:K01999]
B5T_01609  ABC transporter, periplasmic branched chain amino acid binding protein [KO:K01999]
B5T_00011  ABC superfamily ATP binding cassette transporter, binding protein [KO:K01999]
B5T_00842  ABC-type branched-chain amino acid transport system, periplasmic component [KO:K01999]
B5T_01659  ABC-type branched-chain amino acid transport systems, livK-like periplasmic component [KO:K01999]
B5T_04407  livK3; ABC-type branched-chain amino acid transport systems, periplasmic component [KO:K01999]
B5T_03527  Periplasmic substrate-binding protein, ABC-type branched-chain amino acid transporter [KO:K01999]
B5T_03984  ABC-type branched-chain amino acid transport systems periplasmic component-like protein [KO:K01999]
B5T_01890  Branched-chain amino acid ABC transporter, permease protein [KO:K01997]
B5T_02163  Branched-chain amino acid ABC-type transport system, permease components [KO:K01997]
B5T_01155  ABC transporter permease protein [KO:K01997]
B5T_01610  Amino acid or sugar ABC transport system, permease protein, putative [KO:K01997]
B5T_00012  Branched-chain amino acid ABC superfamily ATP binding cassette transporter [KO:K01997]
B5T_00841  Branched-chain amino acid ABC-type transport system, permease component [KO:K01997]
B5T_01655  Amino acid or sugar ABC transport system, permease protein, putative [KO:K01997]
B5T_04408  livH3; Branched-chain amino acid transport system permease protein [KO:K01997]
B5T_03528  Permease protein, ABC-type branched-chain amino acid transporter [KO:K01997]
B5T_00013  Inner-membrane translocator ABC transporter [KO:K01995 K01996 K01998]
B5T_03529  Putative permease protein, ABC-type branched-chain amino acid transporter [KO:K01998]
B5T_04409  livM3; ABC-type branched-chain amino acid transport system, permease component [KO:K01998]
B5T_01891  Branched-chain amino acid ABC transporter, permease protein [KO:K01998]
B5T_02162  livM3; ABC-type branched-chain amino acid transport system, permease component [KO:K01998]
B5T_01156  ABC-type transporter, livM-like permease component [KO:K01998]
B5T_01611  Amino acid or sugar ABC transport system, permease protein, putative [KO:K01998]
B5T_00840  livM; Branched-chain amino acid transport system permease protein [KO:K01998]
B5T_01656  Amino acid or sugar ABC transport system, permease protein, putative [KO:K01998]
B5T_01888  ABC-type transporter, ATPase component: HAAT family [KO:K01995]
B5T_02161  ABC-type branched-chain amino acid transport systems, ATPase component [KO:K01995]
B5T_01154  ABC-type amino acid transport system protein, ATPase component protein [KO:K01995]
B5T_01612  Leucine/isoleucine/valine ABC-like transporter, ATPase subunit [KO:K01995]
B5T_00839  ABC transporter related protein [KO:K01995]
B5T_01657  livG3; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [KO:K01995]
B5T_04410  livG3; ABC-type branched-chain amino acid transport system ATP-binding protein [KO:K01995]
B5T_03530  Leucine/isoleucine/valine ABC-like transporter, ATPase subunit [KO:K01995]
B5T_03531  ATP-binding protein, ABC-type branched-chain amino acid transporter [KO:K01996]
B5T_04411  livF3; ABC-type branched-chain amino acid transport system ATP-binding protein [KO:K01996]
B5T_01889  ABC-type transporter, ATPase component: HAAT family [KO:K01996]
B5T_02160  ABC-type branched-chain amino acid transport systems, ATPase component [KO:K01996]
B5T_01158  livF3; Branched-chain amino acid ABC transporter, ATP-binding protein LivF-3 [KO:K01996]
B5T_01613  Abc-type transporter, atpase component: haat family [KO:K01996]
B5T_00838  ABC transporter related:Hemerythrin HHE cation binding region [KO:K01996]
B5T_01658  ABC-type transporter, ATPase component: HAAT family [KO:K01996]
B5T_00738  Branched-chain amino acid ABC transporter, putative [KO:K11959]
B5T_01047  ABC transporter, periplasmic substrate-binding protein [KO:K11959]
B5T_03978  Urea ABC superfamily ATP binding cassette transporter, binding protein [KO:K11959]
B5T_00737  Branched-chain amino acid ABC transporter, permease protein [KO:K11960]
B5T_01049  Branched-chain amino acid ABC transporter,permease protein [KO:K11960]
B5T_03979  ABC-type transport system permease protein I [KO:K11960]
B5T_01050  urtC_2; Amino acid or sugar ABC transport system, permease protein, putative [KO:K11961]
B5T_00736  Branched-chain amino acid ABC transporter, permease protein [KO:K11961]
B5T_03980  ABC-type transport system permease protein II [KO:K11961]
B5T_00735  Urea ABC transporter ATPase protein UrtD [KO:K11962]
B5T_01051  livG; Branched-chain amino acid ABC transporter, ATP-binding prote [KO:K11962]
B5T_03981  ABC transporter related protein [KO:K11962]
B5T_00734  Urea ABC transporter ATPase protein UrtE [KO:K11963]
B5T_01052  Amino acid ABC transporter, ATP-binding protein, putative [KO:K11963]
B5T_03982  Urea ABC superfamily ATP binding cassette transporter, ABC protein [KO:K11963]
B5T_02371  Oligopeptide ABC transporter, periplasmic peptide-binding pr [KO:K13893]
B5T_02372  oppB; Oligopeptide ABC transporter, permease protein [KO:K13894]
B5T_02373  oppC; ABC transporter, permease protein [KO:K13895]
B5T_02374  oppF; ABC peptide transporter, fused ATPase domains [KO:K13896]
B5T_04333  znuA; High-affinity zinc uptake system protein znuA [KO:K09815]
B5T_04335  znuB; Zinc ABC transporter permease protein [KO:K09816]
B5T_04334  znuC; ABC transporter, ATP-binding protein [KO:K09817] [EC:7.2.2.20]
B5T_01386  sitA; Iron ABC superfamily ATP binding cassette transporter, binding protein [KO:K11604]
B5T_01388  znuB; ABC-type Mn2+/Zn2+ transport systems, permease component [KO:K11605]
B5T_01389  Putative iron transmembrane ABC transporter component [KO:K11606]
B5T_01387  sitB; ABC Mn+2/Fe+2 transporter, ATPase subunit SitB [KO:K11607]
B5T_01751  ABC-type transport system permease protein [KO:K09690]
B5T_01752  ABC transporter related protein [KO:K09691] [EC:7.5.2.14]
B5T_01864  ABC-type transport system, involved in lipoprotein release, permease component [KO:K09808]
B5T_01865  lolD; ABC-type dipeptide/oligopeptide/nickel transport system ATPase component [KO:K09810] [EC:7.6.2.-]
B5T_01575  ccmD; Heme exporter protein CcmD, putative [KO:K02196]
B5T_01574  ccmC; Heme exporter protein C [KO:K02195]
B5T_01573  ccmB; Heme exporter protein B [KO:K02194]
B5T_01572  ccmA; Cytochrome c biogenesis ATP-binding export protein CcmA [KO:K02193] [EC:7.6.2.5]
B5T_03682  Putative permease, YjgP/YjgQ family [KO:K07091]
B5T_03681  Putative permease, YjgP/YjgQ family [KO:K11720]
B5T_03576  Protein containing ABC transporter-like domain [KO:K06861] [EC:7.5.2.5]
B5T_04280  nosY; ABC-type transport system involved in multi-copper enzyme maturation, permease component [KO:K19341]
B5T_04281  nosF; ABC-type multidrug transport system, ATPase component [KO:K19340]
B5T_00232  ftsX; Efflux ABC transporter, permease protein [KO:K09811]
B5T_00233  ftsE; putative ATPase involved in cell division [KO:K09812]
B5T_02511  ABC transporter, transmembrane region [KO:K14698] [EC:7.-.-.-]
B5T_02510  ABC transporter component [KO:K14699] [EC:7.-.-.-]
B5T_02812  msbA; Lipid A export ATP-binding/permease protein MsbA [KO:K11085] [EC:7.5.2.6]
B5T_02006  Protein secretion ABC efflux system, permease and ATP-binding protein [KO:K12541]
B5T_02874  prtD; Lipase B [KO:K12536]
B5T_03051  Putative ABC-type Xenobiotic transport system,ATPase and permease component [KO:K16012]
B5T_03050  ABC transporter permease and ATP-binding protein [KO:K16013]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
PMID:18424520
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
PMID:18375759
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
PMID:10557362
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
PMID:11731493
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
PMID:16135226
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
PMID:11929526
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
PMID:18326572
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
PMID:16109926
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
PMID:17873039
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
PMID:17214741
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
PMID:18805970
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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