KEGG   PATHWAY: afp00010
Entry
afp00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Acidithiobacillus ferriphilus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
afp00010  Glycolysis / Gluconeogenesis
afp00010

Module
afp_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:afp00010]
afp_M00002  Glycolysis, core module involving three-carbon compounds [PATH:afp00010]
afp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:afp00010]
Other DBs
GO: 0006096 0006094
Organism
Acidithiobacillus ferriphilus [GN:afp]
Gene
K1Y48_03120  ROK family protein [KO:K25026] [EC:2.7.1.2]
K1Y48_03530  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
K1Y48_10470  1-phosphofructokinase family hexose kinase [KO:K16370] [EC:2.7.1.11]
K1Y48_07165  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
K1Y48_03630  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
K1Y48_03655  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
K1Y48_06460  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
K1Y48_11805  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
K1Y48_06025  aldolase [KO:K16305] [EC:4.1.2.13 2.2.1.11]
K1Y48_10460  aldolase [KO:K16305] [EC:4.1.2.13 2.2.1.11]
K1Y48_02020  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
K1Y48_03640  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
K1Y48_03645  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
K1Y48_08745  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
K1Y48_10500  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
K1Y48_00110  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
K1Y48_03650  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
K1Y48_06030  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
K1Y48_10505  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
K1Y48_06710  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
K1Y48_06715  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
K1Y48_10490  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
K1Y48_06720  FAD-dependent oxidoreductase [KO:K00382] [EC:1.8.1.4]
K1Y48_10865  NAD(P)/FAD-dependent oxidoreductase [KO:K00382] [EC:1.8.1.4]
K1Y48_12310  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
K1Y48_09510  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
K1Y48_00125  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
K1Y48_11225  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
K1Y48_01495  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
afp00020  Citrate cycle (TCA cycle)
afp00030  Pentose phosphate pathway
afp00500  Starch and sucrose metabolism
afp00620  Pyruvate metabolism
afp00640  Propanoate metabolism
afp00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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