KEGG   PATHWAY: aje04141
Entry
aje04141                    Pathway                                
Name
Protein processing in endoplasmic reticulum - Histoplasma mississippiense
Description
The endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylated. Correctly folded proteins are packaged into transport vesicles that shuttle them to the Golgi complex. Misfolded proteins are retained within the ER lumen in complex with molecular chaperones. Proteins that are terminally misfolded bind to BiP and are directed toward degradation through the proteasome in a process called ER-associated degradation (ERAD). Accumulation of misfolded proteins in the ER causes ER stress and activates a signaling pathway called the unfolded protein response (UPR). In certain severe situations, however, the protective mechanisms activated by the UPR are not sufficient to restore normal ER function and cells die by apoptosis.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
aje04141  Protein processing in endoplasmic reticulum
aje04141

Other DBs
GO: 0030433 0034976
Organism
Histoplasma mississippiense [GN:aje]
Gene
HCAG_02998  protein transport protein SEC61 alpha subunit [KO:K10956]
HCAG_07242  hypothetical protein [KO:K07342]
HCAG_03787  hypothetical protein [KO:K12275]
HCAG_02415  hypothetical protein [KO:K09540]
HCAG_03679  similar to oligosaccharyltransferase alpha subunit [KO:K12666]
HCAG_06200  hypothetical protein [KO:K12667]
HCAG_04601  hypothetical protein [KO:K12668]
HCAG_02030  hypothetical protein [KO:K12669]
HCAG_00671  dolichyl-di-phosphooligosaccharide-protein glycotransferase [KO:K12670]
HCAG_02726  oligosaccharyl transferase STT3 subunit [KO:K07151] [EC:2.4.99.18]
HCAG_05129  similar to glucosidase I [KO:K01228] [EC:3.2.1.106]
HCAG_06817  hypothetical protein [KO:K09486]
HCAG_05805  heat shock 70 kDa protein C precursor [KO:K09490] [EC:3.6.4.10]
HCAG_09066  hypothetical protein [KO:K09523]
HCAG_07372  hypothetical protein [KO:K14002]
HCAG_00545  similar to glucosidase II alpha subunit [KO:K05546] [EC:3.2.1.207]
HCAG_08110  hypothetical protein [KO:K08288]
HCAG_06060  similar to calnexin [KO:K08054]
HCAG_06505  similar to class I alpha-mannosidase [KO:K01230] [EC:3.2.1.113]
HCAG_02354  mannosyl-oligosaccharide alpha-1,2-mannosidase precursor [KO:K01230] [EC:3.2.1.113]
HCAG_05335  similar to alpha-mannosidase IC [KO:K01230] [EC:3.2.1.113]
HCAG_05294  hypothetical protein [KO:K01230] [EC:3.2.1.113]
HCAG_01179  hypothetical protein [KO:K01230] [EC:3.2.1.113]
HCAG_08449  mannosyl-oligosaccharide 1,2-alpha-mannosidase [KO:K23741] [EC:3.2.1.209]
HCAG_04182  mannosyl-oligosaccharide 1,2-alpha-mannosidase [KO:K23741] [EC:3.2.1.209]
HCAG_03891  hypothetical protein [KO:K10082]
HCAG_06520  hypothetical protein [KO:K10080]
HCAG_04840  GTP-binding protein sarA [KO:K07953] [EC:3.6.5.-]
HCAG_08938  protein transport protein SEC13 [KO:K14004]
HCAG_03764  hypothetical protein [KO:K14005]
HCAG_04789  similar to SEC23B [KO:K14006]
HCAG_05252  hypothetical protein [KO:K14007]
HCAG_05444  hypothetical protein [KO:K14007]
HCAG_05392  similar to UDP-glucose:glycoprotein glucosyltransferase [KO:K11718] [EC:2.4.1.-]
HCAG_03630  protein disulfide-isomerase precursor [KO:K09580] [EC:5.3.4.1]
HCAG_02591  protein disulfide-isomerase tigA precursor [KO:K09584] [EC:5.3.4.1]
HCAG_04802  hypothetical protein [KO:K09584] [EC:5.3.4.1]
HCAG_08726  hypothetical protein [KO:K13996] [EC:5.3.4.1]
HCAG_02804  hypothetical protein [KO:K10976] [EC:1.8.4.-]
HCAG_09312  hypothetical protein [KO:K10088]
HCAG_02384  hypothetical protein [KO:K14009]
HCAG_03048  hypothetical protein [KO:K13989]
HCAG_05170  hypothetical protein [KO:K13989]
HCAG_05614  hypothetical protein [KO:K24348]
HCAG_02452  cell division cycle protein 48 [KO:K13525]
HCAG_04746  similar to NPL4 [KO:K14015]
HCAG_02080  hypothetical protein [KO:K14016]
HCAG_00806  heat shock 70 kDa protein [KO:K03283]
HCAG_06431  hypothetical protein [KO:K09503]
HCAG_05568  hypothetical protein [KO:K09518]
HCAG_04686  ATP-dependent molecular chaperone HSC82 [KO:K04079]
HCAG_08211  hypothetical protein [KO:K09562]
HCAG_02306  hypothetical protein [KO:K13993]
HCAG_03521  hypothetical protein [KO:K13719] [EC:3.1.2.-]
HCAG_00738  hypothetical protein [KO:K14018]
HCAG_05172  deubiquitination-protection protein dph1 [KO:K04523]
HCAG_05567  hypothetical protein [KO:K10597] [EC:2.3.2.27]
HCAG_06503  hypothetical protein [KO:K08860] [EC:2.7.11.1]
HCAG_01136  eukaryotic translation initiation factor 2 alpha subunit [KO:K03237]
HCAG_03304  hypothetical protein [KO:K08852] [EC:2.7.11.1 3.1.26.-]
HCAG_07333  hypothetical protein [KO:K10661] [EC:2.3.2.27]
HCAG_07686  similar to ubiquitin-conjugating enzyme E2-28.4KD [KO:K04554] [EC:2.3.2.23]
HCAG_08629  ubiquitin conjugating enzyme [KO:K10575] [EC:2.3.2.23]
HCAG_00611  ubiquitin-conjugating enzyme E2-18 kDa [KO:K04555] [EC:2.3.2.23]
HCAG_07827  hypothetical protein [KO:K14022]
HCAG_02770  hypothetical protein [KO:K10601] [EC:2.3.2.27]
HCAG_02373  hypothetical protein [KO:K14026]
HCAG_08733  hypothetical protein [KO:K09561] [EC:2.3.2.27]
HCAG_01260  ubiquitin-conjugating enzyme E2-16 kDa [KO:K06689] [EC:2.3.2.23]
HCAG_03036  hypothetical protein [KO:K03868] [EC:2.3.2.32]
HCAG_08456  hypothetical protein [KO:K03347]
HCAG_03008  sulfur metabolite repression control protein C [KO:K03094]
Compound
C00076  Calcium cation
G00009   
G00010   
G00011   
G00012   
G10694   
Reference
  Authors
Naidoo N
  Title
ER and aging-Protein folding and the ER stress response.
  Journal
Ageing Res Rev 8:150-9 (2009)
DOI:10.1016/j.arr.2009.03.001
Reference
  Authors
Malhotra JD, Kaufman RJ
  Title
The endoplasmic reticulum and the unfolded protein response.
  Journal
Semin Cell Dev Biol 18:716-31 (2007)
DOI:10.1016/j.semcdb.2007.09.003
Reference
  Authors
Maattanen P, Gehring K, Bergeron JJ, Thomas DY
  Title
Protein quality control in the ER: the recognition of misfolded proteins.
  Journal
Semin Cell Dev Biol 21:500-11 (2010)
DOI:10.1016/j.semcdb.2010.03.006
Reference
  Authors
Stolz A, Wolf DH
  Title
Endoplasmic reticulum associated protein degradation: a chaperone assisted journey to hell.
  Journal
Biochim Biophys Acta 1803:694-705 (2010)
DOI:10.1016/j.bbamcr.2010.02.005
Reference
  Authors
Dejgaard K, Theberge JF, Heath-Engel H, Chevet E, Tremblay ML, Thomas DY
  Title
Organization of the Sec61 translocon, studied by high resolution native electrophoresis.
  Journal
J Proteome Res 9:1763-71 (2010)
DOI:10.1021/pr900900x
Related
pathway
aje00510  N-Glycan biosynthesis
aje03050  Proteasome
aje03060  Protein export
KO pathway
ko04141   
LinkDB

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