KEGG   PATHWAY: aly00310
Entry
aly00310                    Pathway                                
Name
Lysine degradation - Arabidopsis lyrata (lyrate rockcress)
Class
Metabolism; Amino acid metabolism
Pathway map
aly00310  Lysine degradation
aly00310

Other DBs
GO: 0006554
Organism
Arabidopsis lyrata (lyrate rockcress) [GN:aly]
Gene
9305293  alpha-aminoadipic semialdehyde synthase isoform X1 [KO:K14157] [EC:1.5.1.8 1.5.1.9]
9303270  alpha-aminoadipic semialdehyde synthase isoform X1 [KO:K14157] [EC:1.5.1.8 1.5.1.9]
9327851  aldehyde dehydrogenase family 7 member B4 [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
9300449  dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial [KO:K00658] [EC:2.3.1.61]
9305659  dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial isoform X1 [KO:K00658] [EC:2.3.1.61]
9319102  dihydrolipoyl dehydrogenase 1, chloroplastic [KO:K00382] [EC:1.8.1.4]
9321261  dihydrolipoyl dehydrogenase 2, mitochondrial [KO:K00382] [EC:1.8.1.4]
9306249  dihydrolipoyl dehydrogenase 2, chloroplastic [KO:K00382] [EC:1.8.1.4]
9330152  dihydrolipoyl dehydrogenase 1, mitochondrial [KO:K00382] [EC:1.8.1.4]
9306245  probable enoyl-CoA hydratase 1, peroxisomal [KO:K01692] [EC:4.2.1.17]
9299401  probable acetyl-CoA acetyltransferase, cytosolic 2 isoform X1 [KO:K00626] [EC:2.3.1.9]
9299957  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
9316664  probable sarcosine oxidase [KO:K00306] [EC:1.5.3.1 1.5.3.7]
9303116  calmodulin-lysine N-methyltransferase [KO:K18826] [EC:2.1.1.60]
9320156  histone-lysine N-methyltransferase ASHR1 [KO:K11426] [EC:2.1.1.354 2.1.1.357]
9304294  histone-lysine N-methyltransferase ATXR3 [KO:K22748] [EC:2.1.1.354]
9317447  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [KO:K11420] [EC:2.1.1.355]
9299204  histone-lysine N-methyltransferase family member SUVH9 [KO:K11420] [EC:2.1.1.355]
9309710  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [KO:K11420] [EC:2.1.1.355]
9317341  histone-lysine N-methyltransferase family member SUVH2 [KO:K11420] [EC:2.1.1.355]
9314698  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [KO:K11420] [EC:2.1.1.355]
9311013  histone-lysine N-methyltransferase EZA1 isoform X1 [KO:K11430] [EC:2.1.1.356]
9320476  histone-lysine N-methyltransferase SUVR3 [KO:K11433] [EC:2.1.1.357]
9307195  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [KO:K24405] [EC:2.1.1.368]
9310257  histone-lysine N-methyltransferase ATXR6 [KO:K24406] [EC:2.1.1.369]
9309491  histone-lysine N-methyltransferase ATXR5 isoform X1 [KO:K24406] [EC:2.1.1.369]
9313658  aldehyde dehydrogenase family 2 member B4, mitochondrial [KO:K00128] [EC:1.2.1.3]
9323192  aldehyde dehydrogenase family 3 member H1 [KO:K00128] [EC:1.2.1.3]
9303098  aldehyde dehydrogenase family 3 member F1 [KO:K00128] [EC:1.2.1.3]
9305234  aldehyde dehydrogenase family 3 member I1, chloroplastic [KO:K00128] [EC:1.2.1.3]
9326659  aldehyde dehydrogenase family 2 member B7, mitochondrial [KO:K00128] [EC:1.2.1.3]
9327349  LOW QUALITY PROTEIN: aldehyde dehydrogenase family 3 member H1 [KO:K00128] [EC:1.2.1.3]
Compound
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00037  Glycine
C00042  Succinate
C00047  L-Lysine
C00068  Thiamin diphosphate
C00136  Butanoyl-CoA
C00164  Acetoacetate
C00322  2-Oxoadipate
C00332  Acetoacetyl-CoA
C00408  L-Pipecolate
C00431  5-Aminopentanoate
C00449  N6-(L-1,3-Dicarboxypropyl)-L-lysine
C00450  (S)-2,3,4,5-Tetrahydropyridine-2-carboxylate
C00487  Carnitine
C00489  Glutarate
C00527  Glutaryl-CoA
C00739  D-Lysine
C00877  Crotonoyl-CoA
C00956  L-2-Aminoadipate
C00990  5-Aminopentanamide
C01087  (R)-2-Hydroxyglutarate
C01142  (3S)-3,6-Diaminohexanoate
C01144  (S)-3-Hydroxybutanoyl-CoA
C01149  4-Trimethylammoniobutanal
C01181  4-Trimethylammoniobutanoate
C01186  (3S,5S)-3,5-Diaminohexanoate
C01211  Procollagen 5-hydroxy-L-lysine
C01259  (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine
C01672  Cadaverine
C02188  Protein lysine
C02727  N6-Acetyl-L-lysine
C03087  5-Acetamidopentanoate
C03196  (S)-2-Hydroxyglutarate
C03239  6-Amino-2-oxohexanoate
C03273  5-Oxopentanoate
C03366  5-Phosphooxy-L-lysine
C03656  (S)-5-Amino-3-oxohexanoic acid
C03793  N6,N6,N6-Trimethyl-L-lysine
C04020  D-Lysopine
C04076  L-2-Aminoadipate 6-semialdehyde
C04092  Delta1-Piperideine-2-carboxylate
C04487  5-(D-Galactosyloxy)-L-lysine-procollagen
C05161  (2R,5S)-2,5-Diaminohexanoate
C05231  L-3-Aminobutyryl-CoA
C05544  Protein N6-methyl-L-lysine
C05545  Protein N6,N6-dimethyl-L-lysine
C05546  Protein N6,N6,N6-trimethyl-L-lysine
C05548  6-Acetamido-2-oxohexanoate
C05825  2-Amino-5-oxohexanoate
C06157  [Dihydrolipoyllysine-residue succinyltransferase] S-glutaryldihydrolipoyllysine
C12455  5-Aminopentanal
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16741  L-Hydroxylysine
C22667  4-Carboxy-1-hydroxybutyryl-ThPP
Reference
PMID:11802770
  Authors
Vaz FM, Wanders RJ.
  Title
Carnitine biosynthesis in mammals.
  Journal
Biochem J 361:417-29 (2002)
DOI:10.1042/bj3610417
Reference
PMID:1682209
  Authors
Large PJ, Robertson A.
  Title
The route of lysine breakdown in Candida tropicalis.
  Journal
FEMS Microbiol Lett 66:209-13 (1991)
DOI:10.1111/j.1574-6968.1990.tb03998.x
Related
pathway
aly00020  Citrate cycle (TCA cycle)
aly00300  Lysine biosynthesis
aly00780  Biotin metabolism
KO pathway
ko00310   
LinkDB

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