KEGG   PATHWAY: app02010
Entry
app02010                    Pathway                                
Name
ABC transporters - Candidatus Accumulibacter regalis
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
app02010  ABC transporters
app02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Candidatus Accumulibacter regalis [GN:app]
Gene
CAP2UW1_4676  hypothetical protein [KO:K02048]
CAP2UW1_0775  sulfate ABC transporter, periplasmic sulfate-binding protein [KO:K02048]
CAP2UW1_0220  sulfate ABC transporter, periplasmic sulfate-binding protein [KO:K23163]
CAP2UW1_0221  sulfate ABC transporter, inner membrane subunit CysT [KO:K02046]
CAP2UW1_4675  hypothetical protein [KO:K02046]
CAP2UW1_0776  sulfate ABC transporter, inner membrane subunit CysT [KO:K02046]
CAP2UW1_0777  sulfate ABC transporter, inner membrane subunit CysW [KO:K02047]
CAP2UW1_0222  sulfate ABC transporter, inner membrane subunit CysW [KO:K02047]
CAP2UW1_4674  hypothetical protein [KO:K02047]
CAP2UW1_0223  sulfate ABC transporter, ATPase subunit [KO:K02045] [EC:7.3.2.3]
CAP2UW1_0778  sulfate ABC transporter, ATPase subunit [KO:K02045] [EC:7.3.2.3]
CAP2UW1_2962  putative signal peptide protein [KO:K05772]
CAP2UW1_2963  binding-protein-dependent transport systems inner membrane component [KO:K05773]
CAP2UW1_2964  ABC transporter related [KO:K06857] [EC:7.3.2.6]
CAP2UW1_1855  molybdenum ABC transporter, periplasmic molybdate-binding protein [KO:K02020]
CAP2UW1_4454  molybdenum ABC transporter, periplasmic molybdate-binding protein [KO:K02020]
CAP2UW1_4208  molybdenum ABC transporter, periplasmic molybdate-binding protein [KO:K02020]
CAP2UW1_4455  molybdate ABC transporter, inner membrane subunit [KO:K02018]
CAP2UW1_4207  molybdate ABC transporter, inner membrane subunit [KO:K02018]
CAP2UW1_4456  molybdate ABC transporter, ATPase subunit [KO:K02017] [EC:7.3.2.5]
CAP2UW1_4206  ABC transporter related [KO:K02017] [EC:7.3.2.5]
CAP2UW1_1925  extracellular solute-binding protein family 1 [KO:K02012]
CAP2UW1_1926  binding-protein-dependent transport systems inner membrane component [KO:K02011]
CAP2UW1_1927  ABC transporter related [KO:K02010] [EC:7.2.2.7]
CAP2UW1_1639  extracellular solute-binding protein family 1 [KO:K11069]
CAP2UW1_1638  Ornithine carbamoyltransferase [KO:K11070]
CAP2UW1_1637  binding-protein-dependent transport systems inner membrane component [KO:K11071]
CAP2UW1_1636  spermidine/putrescine ABC transporter ATPase subunit [KO:K11072] [EC:7.6.2.11]
CAP2UW1_0617  toluene tolerance family protein [KO:K07323]
CAP2UW1_1067  Mammalian cell entry related domain protein [KO:K02067]
CAP2UW1_0619  Mammalian cell entry related domain protein [KO:K02067]
CAP2UW1_1065  protein of unknown function DUF140 [KO:K02066]
CAP2UW1_0620  protein of unknown function DUF140 [KO:K02066]
CAP2UW1_0616  anti-sigma-factor antagonist [KO:K07122]
CAP2UW1_1066  ABC transporter related [KO:K02065]
CAP2UW1_0621  ABC transporter related [KO:K02065]
CAP2UW1_2005  phosphate binding protein [KO:K02040]
CAP2UW1_2836  conserved hypothetical protein [KO:K02040]
CAP2UW1_1747  phosphate binding protein [KO:K02040]
CAP2UW1_2007  phosphate binding protein [KO:K02040]
CAP2UW1_2004  phosphate ABC transporter, inner membrane subunit PstC [KO:K02037]
CAP2UW1_1749  phosphate ABC transporter, inner membrane subunit PstC [KO:K02037]
CAP2UW1_2003  phosphate ABC transporter, inner membrane subunit PstA [KO:K02038]
CAP2UW1_1750  phosphate ABC transporter, inner membrane subunit PstA [KO:K02038]
CAP2UW1_2002  phosphate ABC transporter, ATPase subunit [KO:K02036] [EC:7.3.2.1]
CAP2UW1_1751  ABC transporter related [KO:K02036] [EC:7.3.2.1]
CAP2UW1_1752  ABC transporter related [KO:K02036] [EC:7.3.2.1]
CAP2UW1_1696  phosphonate ABC transporter, periplasmic phosphonate-binding protein [KO:K02044]
CAP2UW1_1695  phosphonate ABC transporter, inner membrane subunit [KO:K02042]
CAP2UW1_1694  ABC transporter related [KO:K02041] [EC:7.3.2.2]
CAP2UW1_1092  extracellular solute-binding protein family 3 [KO:K10001]
CAP2UW1_1834  extracellular solute-binding protein family 3 [KO:K10001]
CAP2UW1_4241  extracellular solute-binding protein family 3 [KO:K10001]
CAP2UW1_1095  polar amino acid ABC transporter, inner membrane subunit [KO:K10002]
CAP2UW1_1094  polar amino acid ABC transporter, inner membrane subunit [KO:K10003]
CAP2UW1_1096  ABC transporter related [KO:K10004] [EC:7.4.2.1]
CAP2UW1_1615  conserved hypothetical protein [KO:K01999]
CAP2UW1_2211  Extracellular ligand-binding receptor [KO:K01999]
CAP2UW1_4468  Extracellular ligand-binding receptor [KO:K01999]
CAP2UW1_2547  Extracellular ligand-binding receptor [KO:K01999]
CAP2UW1_3612  Extracellular ligand-binding receptor [KO:K01999]
CAP2UW1_2308  Extracellular ligand-binding receptor [KO:K01999]
CAP2UW1_1478  Extracellular ligand-binding receptor [KO:K01999]
CAP2UW1_2210  Extracellular ligand-binding receptor [KO:K01999]
CAP2UW1_4467  inner-membrane translocator [KO:K01997]
CAP2UW1_1613  inner-membrane translocator [KO:K01997]
CAP2UW1_2553  inner-membrane translocator [KO:K01997]
CAP2UW1_3611  inner-membrane translocator [KO:K01997]
CAP2UW1_4466  ABC transporter related [KO:K01995 K01998]
CAP2UW1_1614  inner-membrane translocator [KO:K01998]
CAP2UW1_2554  inner-membrane translocator [KO:K01998]
CAP2UW1_3610  inner-membrane translocator [KO:K01998]
CAP2UW1_1612  ABC transporter related [KO:K01995]
CAP2UW1_2555  ABC transporter related [KO:K01995]
CAP2UW1_3609  ABC transporter related [KO:K01995]
CAP2UW1_1616  ABC transporter related [KO:K01996]
CAP2UW1_2556  ABC transporter related [KO:K01996]
CAP2UW1_3608  ABC transporter related [KO:K01996]
CAP2UW1_4465  ABC transporter related [KO:K01996]
CAP2UW1_1190  urea ABC transporter, urea binding protein [KO:K11959]
CAP2UW1_1191  urea ABC transporter, permease protein UrtB [KO:K11960]
CAP2UW1_1192  urea ABC transporter, permease protein UrtC [KO:K11961]
CAP2UW1_1193  urea ABC transporter, ATP-binding protein UrtD [KO:K11962]
CAP2UW1_1194  urea ABC transporter, ATP-binding protein UrtE [KO:K11963]
CAP2UW1_3991  periplasmic solute binding protein [KO:K09815]
CAP2UW1_3990  ABC-3 protein [KO:K09816]
CAP2UW1_3989  ABC transporter related [KO:K09817] [EC:7.2.2.20]
CAP2UW1_2052  Cobalt transport protein CbiN [KO:K02009]
CAP2UW1_0415  Cobalt transport protein CbiN [KO:K02009]
CAP2UW1_2053  cobalamin biosynthesis protein CbiM [KO:K02007]
CAP2UW1_3076  cobalamin (vitamin B12) biosynthesis CbiM protein [KO:K02007]
CAP2UW1_0416  cobalamin biosynthesis protein CbiM [KO:K02007]
CAP2UW1_2051  cobalt transport protein [KO:K02008]
CAP2UW1_3075  cobalt ABC transporter, inner membrane subunit CbiQ [KO:K02008]
CAP2UW1_2050  cobalt ABC transporter, ATPase subunit [KO:K02006]
CAP2UW1_3074  cobalt ABC transporter, ATPase subunit [KO:K02006]
CAP2UW1_3577  ABC-2 type transporter, NodJ family [KO:K09694]
CAP2UW1_3576  ABC transporter related [KO:K09695]
CAP2UW1_1041  lipoprotein releasing system, transmembrane protein, LolC/E family [KO:K09808]
CAP2UW1_1042  lipoprotein releasing system, ATP-binding protein [KO:K09810] [EC:7.6.2.-]
CAP2UW1_0725  heme exporter protein CcmD [KO:K02196]
CAP2UW1_0726  heme exporter protein CcmC [KO:K02195]
CAP2UW1_0727  heme exporter protein CcmB [KO:K02194]
CAP2UW1_0728  heme exporter protein CcmA [KO:K02193] [EC:7.6.2.5]
CAP2UW1_4126  permease YjgP/YjgQ family protein [KO:K07091]
CAP2UW1_4125  permease YjgP/YjgQ family protein [KO:K11720]
CAP2UW1_4310  ABC transporter related [KO:K06861] [EC:7.5.2.5]
CAP2UW1_4015  protein of unknown function DUF214 [KO:K09811]
CAP2UW1_4014  ABC transporter related [KO:K09812]
CAP2UW1_4192  lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA [KO:K11085] [EC:7.5.2.6]
CAP2UW1_1342  ABC transporter related [KO:K11004]
CAP2UW1_2705  ABC transporter related [KO:K11004]
CAP2UW1_0458  ABC transporter related [KO:K11004]
CAP2UW1_3466  ABC transporter related [KO:K24821]
CAP2UW1_4234  type I secretion system ATPase [KO:K12541]
CAP2UW1_2830  type I secretion system ATPase [KO:K12536]
CAP2UW1_2424  ABC transporter domain protein [KO:K02471]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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