KEGG   PATHWAY: arw00260
Entry
arw00260                    Pathway                                
Name
Glycine, serine and threonine metabolism - Arthrobacter alpinus A3
Description
Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].
Class
Metabolism; Amino acid metabolism
Pathway map
arw00260  Glycine, serine and threonine metabolism
arw00260

Module
arw_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:arw00260]
arw_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:arw00260]
arw_M00555  Betaine biosynthesis, choline => betaine [PATH:arw00260]
arw_M00621  Glycine cleavage system [PATH:arw00260]
Other DBs
GO: 0006544 0006563 0070178 0006566
Organism
Arthrobacter alpinus A3 [GN:arw]
Gene
MB46_14710  aspartate kinase [KO:K00928] [EC:2.7.2.4]
MB46_13700  aspartate-semialdehyde dehydrogenase [KO:K00133] [EC:1.2.1.11]
MB46_00510  homoserine dehydrogenase [KO:K00003] [EC:1.1.1.3]
MB46_04105  homoserine dehydrogenase [KO:K00003] [EC:1.1.1.3]
MB46_10945  homoserine dehydrogenase [KO:K00003] [EC:1.1.1.3]
MB46_10935  homoserine kinase [KO:K00872] [EC:2.7.1.39]
MB46_10940  threonine synthase [KO:K01733] [EC:4.2.3.1]
MB46_07830  threonine aldolase [KO:K01620] [EC:4.1.2.48]
MB46_01840  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
MB46_12250  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
MB46_09420  hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
MB46_14845  glycerate kinase [KO:K00865] [EC:2.7.1.165]
MB46_15630  glycerate kinase [KO:K00865] [EC:2.7.1.165]
MB46_19040  phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
MB46_10170  3-phosphoglycerate dehydrogenase [KO:K00058] [EC:1.1.1.95 1.1.1.399]
MB46_00980  phosphoserine aminotransferase [KO:K00831] [EC:2.6.1.52]
MB46_05225  phosphoserine phosphatase [KO:K01079] [EC:3.1.3.3]
MB46_03100  glycine C-acetyltransferase [KO:K00639] [EC:2.3.1.29]
MB46_03095  tdh; L-threonine 3-dehydrogenase [KO:K00060] [EC:1.1.1.103]
MB46_07035  histamine oxidase [KO:K00276] [EC:1.4.3.21]
MB46_08360  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
MB46_12265  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
MB46_12260  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
MB46_08050  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
MB46_08390  glycine cleavage system protein H [KO:K02437]
MB46_12255  glycine cleavage system protein H [KO:K02437]
MB46_09520  choline oxidase [KO:K17755] [EC:1.1.3.17]
MB46_09525  betaine-aldehyde dehydrogenase [KO:K00130] [EC:1.2.1.8]
MB46_06520  gamma-aminobutyraldehyde dehydrogenase [KO:K00130] [EC:1.2.1.8]
MB46_14150  gamma-aminobutyraldehyde dehydrogenase [KO:K00130] [EC:1.2.1.8]
MB46_05975  FAD-dependent oxidoreductase [KO:K00301] [EC:1.5.3.1]
MB46_13885  cystathionine beta-synthase [KO:K01697] [EC:4.2.1.22]
MB46_12245  serine dehydratase [KO:K01752] [EC:4.3.1.17]
MB46_04805  threonine dehydratase [KO:K01754] [EC:4.3.1.19]
MB46_02075  threonine dehydratase [KO:K01754] [EC:4.3.1.19]
MB46_00520  alanine racemase [KO:K25317] [EC:5.1.1.10]
MB46_07630  tryptophan synthase subunit alpha [KO:K01695] [EC:4.2.1.20]
MB46_07635  tryptophan synthase subunit beta [KO:K01696] [EC:4.2.1.20]
MB46_04410  pyridoxal-dependent decarboxylase [KO:K13745] [EC:4.1.1.86]
Compound
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00037  Glycine
C00048  Glyoxylate
C00049  L-Aspartate
C00065  L-Serine
C00078  L-Tryptophan
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00109  2-Oxobutanoate
C00114  Choline
C00143  5,10-Methylenetetrahydrofolate
C00168  Hydroxypyruvate
C00188  L-Threonine
C00197  3-Phospho-D-glycerate
C00213  Sarcosine
C00258  D-Glycerate
C00263  L-Homoserine
C00300  Creatine
C00430  5-Aminolevulinate
C00441  L-Aspartate 4-semialdehyde
C00546  Methylglyoxal
C00576  Betaine aldehyde
C00581  Guanidinoacetate
C00631  2-Phospho-D-glycerate
C00719  Betaine
C00740  D-Serine
C00986  1,3-Diaminopropane
C01005  O-Phospho-L-serine
C01026  N,N-Dimethylglycine
C01102  O-Phospho-L-homoserine
C01242  [Protein]-S8-aminomethyldihydrolipoyllysine
C01888  Aminoacetone
C02051  Lipoylprotein
C02291  L-Cystathionine
C02737  Phosphatidylserine
C02972  Dihydrolipoylprotein
C03082  4-Phospho-L-aspartate
C03194  (R)-1-Aminopropan-2-ol
C03232  3-Phosphonooxypyruvate
C03283  L-2,4-Diaminobutanoate
C03508  L-2-Amino-3-oxobutanoic acid
C05519  L-Allothreonine
C06231  Ectoine
C06442  N(gamma)-Acetyldiaminobutyrate
C16432  5-Hydroxyectoine
C19929  N(alpha)-Acetyl-L-2,4-diaminobutyrate
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
PMID:11823218
  Authors
Kuhlmann AU, Bremer E.
  Title
Osmotically regulated synthesis of the compatible solute ectoine in Bacillus pasteurii and related Bacillus spp.
  Journal
Appl Environ Microbiol 68:772-83 (2002)
DOI:10.1128/AEM.68.2.772-783.2002
Reference
PMID:10473374
  Authors
Canovas D, Borges N, Vargas C, Ventosa A, Nieto JJ, Santos H.
  Title
Role of Ngamma-acetyldiaminobutyrate as an enzyme stabilizer and an intermediate in the biosynthesis of hydroxyectoine.
  Journal
Appl Environ Microbiol 65:3774-9 (1999)
DOI:10.1128/AEM.65.9.3774-3779.1999
Reference
PMID:17636255
  Authors
Bursy J, Pierik AJ, Pica N, Bremer E.
  Title
Osmotically induced synthesis of the compatible solute hydroxyectoine is mediated by an evolutionarily conserved ectoine hydroxylase.
  Journal
J Biol Chem 282:31147-55 (2007)
DOI:10.1074/jbc.M704023200
Reference
PMID:16707670
  Authors
Garcia-Estepa R, Argandona M, Reina-Bueno M, Capote N, Iglesias-Guerra F, Nieto JJ, Vargas C.
  Title
The ectD gene, which is involved in the synthesis of the compatible solute hydroxyectoine, is essential for thermoprotection of the halophilic bacterium Chromohalobacter salexigens.
  Journal
J Bacteriol 188:3774-84 (2006)
DOI:10.1128/JB.00136-06
Reference
PMID:15470257
  Authors
Arevalo-Rodriguez M, Pan X, Boeke JD, Heitman J
  Title
FKBP12 controls aspartate pathway flux in Saccharomyces cerevisiae to prevent toxic intermediate accumulation.
  Journal
Eukaryot Cell 3:1287-96 (2004)
DOI:10.1128/EC.3.5.1287-1296.2004
Reference
PMID:7639721
  Authors
Rees WD, Hay SM
  Title
The biosynthesis of threonine by mammalian cells: expression of a complete bacterial biosynthetic pathway in an animal cell.
  Journal
Biochem J 309 ( Pt 3):999-1007 (1995)
DOI:10.1042/bj3090999
Reference
PMID:11341914
  Authors
Jacques SL, Nieman C, Bareich D, Broadhead G, Kinach R, Honek JF, Wright GD
  Title
Characterization of yeast homoserine dehydrogenase, an antifungal target: the invariant histidine 309 is important for enzyme integrity.
  Journal
Biochim Biophys Acta 1544:28-41 (2001)
DOI:10.1016/S0167-4838(00)00203-X
Reference
PMID:15520012
  Authors
Chen X, Jhee KH, Kruger WD
  Title
Production of the neuromodulator H2S by cystathionine beta-synthase via the condensation of cysteine and homocysteine.
  Journal
J Biol Chem 279:52082-6 (2004)
DOI:10.1074/jbc.C400481200
Related
pathway
arw00010  Glycolysis / Gluconeogenesis
arw00020  Citrate cycle (TCA cycle)
arw00230  Purine metabolism
arw00250  Alanine, aspartate and glutamate metabolism
arw00270  Cysteine and methionine metabolism
arw00290  Valine, leucine and isoleucine biosynthesis
arw00300  Lysine biosynthesis
arw00330  Arginine and proline metabolism
arw00460  Cyanoamino acid metabolism
arw00470  D-Amino acid metabolism
arw00564  Glycerophospholipid metabolism
arw00600  Sphingolipid metabolism
arw00620  Pyruvate metabolism
arw00630  Glyoxylate and dicarboxylate metabolism
arw00640  Propanoate metabolism
arw00680  Methane metabolism
arw00860  Porphyrin metabolism
arw00920  Sulfur metabolism
KO pathway
ko00260   
LinkDB

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