PATHWAY: atw01100 Help Entry atw01100                    Pathway                                 Name Metabolic pathways - Pseudazoarcus pumilus Class BRITE hierarchy Pathway map atw01100   Metabolic pathways Module atw_M00002   Glycolysis, core module involving three-carbon compounds [PATH:atw01100] atw_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:atw01100] atw_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:atw01100] atw_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:atw01100] atw_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:atw01100] atw_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:atw01100] atw_M00012   Glyoxylate cycle [PATH:atw01100] atw_M00015   Proline biosynthesis, glutamate => proline [PATH:atw01100] atw_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:atw01100] atw_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:atw01100] atw_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:atw01100] atw_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:atw01100] atw_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:atw01100] atw_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:atw01100] atw_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:atw01100] atw_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:atw01100] atw_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:atw01100] atw_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:atw01100] atw_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:atw01100] atw_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:atw01100] atw_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:atw01100] atw_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:atw01100] atw_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:atw01100] atw_M00063   CMP-KDO biosynthesis [PATH:atw01100] atw_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:atw01100] atw_M00082   Fatty acid biosynthesis, initiation [PATH:atw01100] atw_M00083   Fatty acid biosynthesis, elongation [PATH:atw01100] atw_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:atw01100] atw_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:atw01100] atw_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:atw01100] atw_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:atw01100] atw_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:atw01100] atw_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:atw01100] atw_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:atw01100] atw_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:atw01100] atw_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:atw01100] atw_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:atw01100] atw_M00149   Succinate dehydrogenase, prokaryotes [PATH:atw01100] atw_M00151   Cytochrome bc1 complex respiratory unit [PATH:atw01100] atw_M00155   Cytochrome c oxidase, prokaryotes [PATH:atw01100] atw_M00156   Cytochrome c oxidase, cbb3-type [PATH:atw01100] atw_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:atw01100] atw_M00168   CAM (Crassulacean acid metabolism), dark [PATH:atw01100] atw_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:atw01100] atw_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:atw01100] atw_M00529   Denitrification, nitrate => nitrogen [PATH:atw01100] atw_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:atw01100] atw_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:atw01100] atw_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:atw01100] atw_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:atw01100] atw_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:atw01100] atw_M00793   dTDP-L-rhamnose biosynthesis [PATH:atw01100] atw_M00844   Arginine biosynthesis, ornithine => arginine [PATH:atw01100] atw_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:atw01100] atw_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:atw01100] atw_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:atw01100] atw_M00970   Proline degradation, proline => glutamate [PATH:atw01100] Organism Pseudazoarcus pumilus [GN:atw] Related pathway atw00010   Glycolysis / Gluconeogenesis atw00020   Citrate cycle (TCA cycle) atw00030   Pentose phosphate pathway atw00040   Pentose and glucuronate interconversions atw00051   Fructose and mannose metabolism atw00052   Galactose metabolism atw00053   Ascorbate and aldarate metabolism atw00061   Fatty acid biosynthesis atw00071   Fatty acid degradation atw00130   Ubiquinone and other terpenoid-quinone biosynthesis atw00190   Oxidative phosphorylation atw00220   Arginine biosynthesis atw00230   Purine metabolism atw00240   Pyrimidine metabolism atw00250   Alanine, aspartate and glutamate metabolism atw00260   Glycine, serine and threonine metabolism atw00261   Monobactam biosynthesis atw00270   Cysteine and methionine metabolism atw00280   Valine, leucine and isoleucine degradation atw00290   Valine, leucine and isoleucine biosynthesis atw00300   Lysine biosynthesis atw00310   Lysine degradation atw00330   Arginine and proline metabolism atw00332   Carbapenem biosynthesis atw00340   Histidine metabolism atw00350   Tyrosine metabolism atw00360   Phenylalanine metabolism atw00361   Chlorocyclohexane and chlorobenzene degradation atw00362   Benzoate degradation atw00364   Fluorobenzoate degradation atw00365   Furfural degradation atw00380   Tryptophan metabolism atw00400   Phenylalanine, tyrosine and tryptophan biosynthesis atw00401   Novobiocin biosynthesis atw00410   beta-Alanine metabolism atw00430   Taurine and hypotaurine metabolism atw00450   Selenocompound metabolism atw00460   Cyanoamino acid metabolism atw00470   D-Amino acid metabolism atw00480   Glutathione metabolism atw00500   Starch and sucrose metabolism atw00520   Amino sugar and nucleotide sugar metabolism atw00521   Streptomycin biosynthesis atw00523   Polyketide sugar unit biosynthesis atw00525   Acarbose and validamycin biosynthesis atw00540   Lipopolysaccharide biosynthesis atw00541   O-Antigen nucleotide sugar biosynthesis atw00543   Exopolysaccharide biosynthesis atw00550   Peptidoglycan biosynthesis atw00552   Teichoic acid biosynthesis atw00561   Glycerolipid metabolism atw00562   Inositol phosphate metabolism atw00564   Glycerophospholipid metabolism atw00620   Pyruvate metabolism atw00621   Dioxin degradation atw00622   Xylene degradation atw00623   Toluene degradation atw00625   Chloroalkane and chloroalkene degradation atw00626   Naphthalene degradation atw00627   Aminobenzoate degradation atw00630   Glyoxylate and dicarboxylate metabolism atw00633   Nitrotoluene degradation atw00640   Propanoate metabolism atw00650   Butanoate metabolism atw00660   C5-Branched dibasic acid metabolism atw00670   One carbon pool by folate atw00680   Methane metabolism atw00710   Carbon fixation by Calvin cycle atw00720   Other carbon fixation pathways atw00730   Thiamine metabolism atw00740   Riboflavin metabolism atw00750   Vitamin B6 metabolism atw00760   Nicotinate and nicotinamide metabolism atw00770   Pantothenate and CoA biosynthesis atw00780   Biotin metabolism atw00785   Lipoic acid metabolism atw00790   Folate biosynthesis atw00860   Porphyrin metabolism atw00900   Terpenoid backbone biosynthesis atw00906   Carotenoid biosynthesis atw00907   Pinene, camphor and geraniol degradation atw00910   Nitrogen metabolism atw00920   Sulfur metabolism atw00930   Caprolactam degradation atw00999   Biosynthesis of various plant secondary metabolites atw01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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