PATHWAY: avm01100 Help Entry avm01100                    Pathway                                 Name Metabolic pathways - Archangium violaceum Class BRITE hierarchy Pathway map avm01100   Metabolic pathways Module avm_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:avm01100] avm_M00002   Glycolysis, core module involving three-carbon compounds [PATH:avm01100] avm_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:avm01100] avm_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:avm01100] avm_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:avm01100] avm_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:avm01100] avm_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:avm01100] avm_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:avm01100] avm_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:avm01100] avm_M00012   Glyoxylate cycle [PATH:avm01100] avm_M00015   Proline biosynthesis, glutamate => proline [PATH:avm01100] avm_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:avm01100] avm_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:avm01100] avm_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:avm01100] avm_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:avm01100] avm_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:avm01100] avm_M00021   Cysteine biosynthesis, serine => cysteine [PATH:avm01100] avm_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:avm01100] avm_M00026   Histidine biosynthesis, PRPP => histidine [PATH:avm01100] avm_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:avm01100] avm_M00035   Methionine degradation [PATH:avm01100] avm_M00038   Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH:avm01100] avm_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:avm01100] avm_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:avm01100] avm_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:avm01100] avm_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:avm01100] avm_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:avm01100] avm_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:avm01100] avm_M00063   CMP-KDO biosynthesis [PATH:avm01100] avm_M00082   Fatty acid biosynthesis, initiation [PATH:avm01100] avm_M00083   Fatty acid biosynthesis, elongation [PATH:avm01100] avm_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:avm01100] avm_M00087   beta-Oxidation [PATH:avm01100] avm_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:avm01100] avm_M00098   Acylglycerol degradation [PATH:avm01100] avm_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:avm01100] avm_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:avm01100] avm_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:avm01100] avm_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:avm01100] avm_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:avm01100] avm_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:avm01100] avm_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:avm01100] avm_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:avm01100] avm_M00155   Cytochrome c oxidase, prokaryotes [PATH:avm01100] avm_M00156   Cytochrome c oxidase, cbb3-type [PATH:avm01100] avm_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:avm01100] avm_M00168   CAM (Crassulacean acid metabolism), dark [PATH:avm01100] avm_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:avm01100] avm_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:avm01100] avm_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:avm01100] avm_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:avm01100] avm_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:avm01100] avm_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:avm01100] avm_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:avm01100] avm_M00546   Purine degradation, xanthine => urea [PATH:avm01100] avm_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:avm01100] avm_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:avm01100] avm_M00621   Glycine cleavage system [PATH:avm01100] avm_M00793   dTDP-L-rhamnose biosynthesis [PATH:avm01100] avm_M00844   Arginine biosynthesis, ornithine => arginine [PATH:avm01100] avm_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:avm01100] avm_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:avm01100] avm_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:avm01100] avm_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:avm01100] avm_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:avm01100] avm_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:avm01100] avm_M00912   NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:avm01100] avm_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:avm01100] avm_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:avm01100] avm_M00970   Proline degradation, proline => glutamate [PATH:avm01100] Organism Archangium violaceum [GN:avm] Related pathway avm00010   Glycolysis / Gluconeogenesis avm00020   Citrate cycle (TCA cycle) avm00030   Pentose phosphate pathway avm00040   Pentose and glucuronate interconversions avm00051   Fructose and mannose metabolism avm00052   Galactose metabolism avm00053   Ascorbate and aldarate metabolism avm00061   Fatty acid biosynthesis avm00071   Fatty acid degradation avm00100   Steroid biosynthesis avm00130   Ubiquinone and other terpenoid-quinone biosynthesis avm00190   Oxidative phosphorylation avm00220   Arginine biosynthesis avm00230   Purine metabolism avm00240   Pyrimidine metabolism avm00250   Alanine, aspartate and glutamate metabolism avm00260   Glycine, serine and threonine metabolism avm00261   Monobactam biosynthesis avm00270   Cysteine and methionine metabolism avm00280   Valine, leucine and isoleucine degradation avm00290   Valine, leucine and isoleucine biosynthesis avm00300   Lysine biosynthesis avm00310   Lysine degradation avm00311   Penicillin and cephalosporin biosynthesis avm00330   Arginine and proline metabolism avm00332   Carbapenem biosynthesis avm00340   Histidine metabolism avm00350   Tyrosine metabolism avm00360   Phenylalanine metabolism avm00361   Chlorocyclohexane and chlorobenzene degradation avm00362   Benzoate degradation avm00364   Fluorobenzoate degradation avm00380   Tryptophan metabolism avm00400   Phenylalanine, tyrosine and tryptophan biosynthesis avm00401   Novobiocin biosynthesis avm00405   Phenazine biosynthesis avm00410   beta-Alanine metabolism avm00430   Taurine and hypotaurine metabolism avm00450   Selenocompound metabolism avm00460   Cyanoamino acid metabolism avm00470   D-Amino acid metabolism avm00480   Glutathione metabolism avm00500   Starch and sucrose metabolism avm00511   Other glycan degradation avm00520   Amino sugar and nucleotide sugar metabolism avm00521   Streptomycin biosynthesis avm00523   Polyketide sugar unit biosynthesis avm00525   Acarbose and validamycin biosynthesis avm00540   Lipopolysaccharide biosynthesis avm00541   O-Antigen nucleotide sugar biosynthesis avm00542   O-Antigen repeat unit biosynthesis avm00543   Exopolysaccharide biosynthesis avm00550   Peptidoglycan biosynthesis avm00552   Teichoic acid biosynthesis avm00561   Glycerolipid metabolism avm00562   Inositol phosphate metabolism avm00564   Glycerophospholipid metabolism avm00565   Ether lipid metabolism avm00590   Arachidonic acid metabolism avm00592   alpha-Linolenic acid metabolism avm00600   Sphingolipid metabolism avm00620   Pyruvate metabolism avm00621   Dioxin degradation avm00622   Xylene degradation avm00623   Toluene degradation avm00625   Chloroalkane and chloroalkene degradation avm00626   Naphthalene degradation avm00627   Aminobenzoate degradation avm00630   Glyoxylate and dicarboxylate metabolism avm00640   Propanoate metabolism avm00643   Styrene degradation avm00650   Butanoate metabolism avm00660   C5-Branched dibasic acid metabolism avm00670   One carbon pool by folate avm00680   Methane metabolism avm00710   Carbon fixation by Calvin cycle avm00720   Other carbon fixation pathways avm00730   Thiamine metabolism avm00740   Riboflavin metabolism avm00750   Vitamin B6 metabolism avm00760   Nicotinate and nicotinamide metabolism avm00770   Pantothenate and CoA biosynthesis avm00780   Biotin metabolism avm00785   Lipoic acid metabolism avm00790   Folate biosynthesis avm00860   Porphyrin metabolism avm00900   Terpenoid backbone biosynthesis avm00903   Limonene degradation avm00906   Carotenoid biosynthesis avm00907   Pinene, camphor and geraniol degradation avm00909   Sesquiterpenoid and triterpenoid biosynthesis avm00910   Nitrogen metabolism avm00920   Sulfur metabolism avm00930   Caprolactam degradation avm00946   Degradation of flavonoids avm00997   Biosynthesis of various other secondary metabolites avm00998   Biosynthesis of various antibiotics avm00999   Biosynthesis of various plant secondary metabolites avm01040   Biosynthesis of unsaturated fatty acids avm01051   Biosynthesis of ansamycins avm01053   Biosynthesis of siderophore group nonribosomal peptides avm01055   Biosynthesis of vancomycin group antibiotics avm01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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