KEGG   PATHWAY: bdi01200
Entry
bdi01200                    Pathway                                
Name
Carbon metabolism - Brachypodium distachyon (stiff brome)
Description
Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains carbon utilization pathways of glycolysis (map00010), pentose phosphate pathway (map00030), and citrate cycle (map00020), and six known carbon fixation pathways (map00710 and map00720) as well as some pathways of methane metabolism (map00680). The six carbon fixation pathways are: (1) reductive pentose phosphate cycle (Calvin cycle) in plants and cyanobacteria that perform oxygenic photosynthesis, (2) reductive citrate cycle in photosynthetic green sulfur bacteria and some chemolithoautotrophs, (3) 3-hydroxypropionate bi-cycle in photosynthetic green nonsulfur bacteria, two variants of 4-hydroxybutyrate pathways in Crenarchaeota called (4) hydroxypropionate-hydroxybutyrate cycle and (5) dicarboxylate-hydroxybutyrate cycle, and (6) reductive acetyl-CoA pathway in methanogenic bacteria.
Class
Pathway map
bdi01200  Carbon metabolism
bdi01200

Module
bdi_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bdi01200]
bdi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:bdi01200]
bdi_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bdi01200]
bdi_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:bdi01200]
bdi_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bdi01200]
bdi_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bdi01200]
bdi_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:bdi01200]
bdi_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bdi01200]
bdi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bdi01200]
bdi_M00012  Glyoxylate cycle [PATH:bdi01200]
bdi_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:bdi01200]
bdi_M00021  Cysteine biosynthesis, serine => cysteine [PATH:bdi01200]
bdi_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:bdi01200]
bdi_M00168  CAM (Crassulacean acid metabolism), dark [PATH:bdi01200]
bdi_M00169  CAM (Crassulacean acid metabolism), light [PATH:bdi01200]
bdi_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:bdi01200]
bdi_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:bdi01200]
bdi_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:bdi01200]
bdi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bdi01200]
bdi_M00532  Photorespiration [PATH:bdi01200]
bdi_M00621  Glycine cleavage system [PATH:bdi01200]
Organism
Brachypodium distachyon (stiff brome) [GN:bdi]
KO pathway
ko01200   
LinkDB

DBGET integrated database retrieval system