PATHWAY: bif01100 Help Entry bif01100                    Pathway                                 Name Metabolic pathways - Bacillus infantis Class BRITE hierarchy Pathway map bif01100   Metabolic pathways Module bif_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bif01100] bif_M00002   Glycolysis, core module involving three-carbon compounds [PATH:bif01100] bif_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bif01100] bif_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bif01100] bif_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:bif01100] bif_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bif01100] bif_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bif01100] bif_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:bif01100] bif_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bif01100] bif_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bif01100] bif_M00012   Glyoxylate cycle [PATH:bif01100] bif_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:bif01100] bif_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bif01100] bif_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bif01100] bif_M00021   Cysteine biosynthesis, serine => cysteine [PATH:bif01100] bif_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bif01100] bif_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:bif01100] bif_M00026   Histidine biosynthesis, PRPP => histidine [PATH:bif01100] bif_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:bif01100] bif_M00034   Methionine salvage pathway [PATH:bif01100] bif_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:bif01100] bif_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:bif01100] bif_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bif01100] bif_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bif01100] bif_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bif01100] bif_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bif01100] bif_M00082   Fatty acid biosynthesis, initiation [PATH:bif01100] bif_M00083   Fatty acid biosynthesis, elongation [PATH:bif01100] bif_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:bif01100] bif_M00087   beta-Oxidation [PATH:bif01100] bif_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:bif01100] bif_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:bif01100] bif_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bif01100] bif_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:bif01100] bif_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bif01100] bif_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:bif01100] bif_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bif01100] bif_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:bif01100] bif_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:bif01100] bif_M00135   GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:bif01100] bif_M00140   C1-unit interconversion, prokaryotes [PATH:bif01100] bif_M00151   Cytochrome bc1 complex respiratory unit [PATH:bif01100] bif_M00155   Cytochrome c oxidase, prokaryotes [PATH:bif01100] bif_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:bif01100] bif_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bif01100] bif_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:bif01100] bif_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:bif01100] bif_M00416   Cytochrome aa3-600 menaquinol oxidase [PATH:bif01100] bif_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bif01100] bif_M00525   Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:bif01100] bif_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:bif01100] bif_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bif01100] bif_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:bif01100] bif_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bif01100] bif_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:bif01100] bif_M00609   Cysteine biosynthesis, methionine => cysteine [PATH:bif01100] bif_M00621   Glycine cleavage system [PATH:bif01100] bif_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:bif01100] bif_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:bif01100] bif_M00793   dTDP-L-rhamnose biosynthesis [PATH:bif01100] bif_M00844   Arginine biosynthesis, ornithine => arginine [PATH:bif01100] bif_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bif01100] bif_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bif01100] bif_M00883   Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bif01100] bif_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:bif01100] bif_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bif01100] bif_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bif01100] bif_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bif01100] bif_M00970   Proline degradation, proline => glutamate [PATH:bif01100] bif_M00972   Proline metabolism [PATH:bif01100] Organism Bacillus infantis [GN:bif] Related pathway bif00010   Glycolysis / Gluconeogenesis bif00020   Citrate cycle (TCA cycle) bif00030   Pentose phosphate pathway bif00040   Pentose and glucuronate interconversions bif00051   Fructose and mannose metabolism bif00052   Galactose metabolism bif00053   Ascorbate and aldarate metabolism bif00061   Fatty acid biosynthesis bif00062   Fatty acid elongation bif00071   Fatty acid degradation bif00100   Steroid biosynthesis bif00130   Ubiquinone and other terpenoid-quinone biosynthesis bif00190   Oxidative phosphorylation bif00220   Arginine biosynthesis bif00230   Purine metabolism bif00240   Pyrimidine metabolism bif00250   Alanine, aspartate and glutamate metabolism bif00260   Glycine, serine and threonine metabolism bif00261   Monobactam biosynthesis bif00270   Cysteine and methionine metabolism bif00280   Valine, leucine and isoleucine degradation bif00290   Valine, leucine and isoleucine biosynthesis bif00300   Lysine biosynthesis bif00310   Lysine degradation bif00311   Penicillin and cephalosporin biosynthesis bif00330   Arginine and proline metabolism bif00340   Histidine metabolism bif00350   Tyrosine metabolism bif00360   Phenylalanine metabolism bif00362   Benzoate degradation bif00380   Tryptophan metabolism bif00400   Phenylalanine, tyrosine and tryptophan biosynthesis bif00401   Novobiocin biosynthesis bif00410   beta-Alanine metabolism bif00430   Taurine and hypotaurine metabolism bif00450   Selenocompound metabolism bif00460   Cyanoamino acid metabolism bif00470   D-Amino acid metabolism bif00480   Glutathione metabolism bif00500   Starch and sucrose metabolism bif00511   Other glycan degradation bif00520   Amino sugar and nucleotide sugar metabolism bif00521   Streptomycin biosynthesis bif00523   Polyketide sugar unit biosynthesis bif00525   Acarbose and validamycin biosynthesis bif00540   Lipopolysaccharide biosynthesis bif00541   O-Antigen nucleotide sugar biosynthesis bif00542   O-Antigen repeat unit biosynthesis bif00543   Exopolysaccharide biosynthesis bif00550   Peptidoglycan biosynthesis bif00552   Teichoic acid biosynthesis bif00561   Glycerolipid metabolism bif00562   Inositol phosphate metabolism bif00564   Glycerophospholipid metabolism bif00592   alpha-Linolenic acid metabolism bif00600   Sphingolipid metabolism bif00620   Pyruvate metabolism bif00622   Xylene degradation bif00625   Chloroalkane and chloroalkene degradation bif00626   Naphthalene degradation bif00627   Aminobenzoate degradation bif00630   Glyoxylate and dicarboxylate metabolism bif00640   Propanoate metabolism bif00643   Styrene degradation bif00650   Butanoate metabolism bif00660   C5-Branched dibasic acid metabolism bif00670   One carbon pool by folate bif00680   Methane metabolism bif00710   Carbon fixation by Calvin cycle bif00720   Other carbon fixation pathways bif00730   Thiamine metabolism bif00740   Riboflavin metabolism bif00750   Vitamin B6 metabolism bif00760   Nicotinate and nicotinamide metabolism bif00770   Pantothenate and CoA biosynthesis bif00780   Biotin metabolism bif00785   Lipoic acid metabolism bif00790   Folate biosynthesis bif00860   Porphyrin metabolism bif00900   Terpenoid backbone biosynthesis bif00906   Carotenoid biosynthesis bif00907   Pinene, camphor and geraniol degradation bif00909   Sesquiterpenoid and triterpenoid biosynthesis bif00910   Nitrogen metabolism bif00920   Sulfur metabolism bif00946   Degradation of flavonoids bif00999   Biosynthesis of various plant secondary metabolites KO pathway ko01100     LinkDB All DBs

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