PATHWAY: bit01100 Help Entry bit01100                    Pathway                                 Name Metabolic pathways - Bacillus spizizenii Class BRITE hierarchy Pathway map bit01100   Metabolic pathways Module bit_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bit01100] bit_M00002   Glycolysis, core module involving three-carbon compounds [PATH:bit01100] bit_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bit01100] bit_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bit01100] bit_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:bit01100] bit_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bit01100] bit_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bit01100] bit_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:bit01100] bit_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bit01100] bit_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bit01100] bit_M00015   Proline biosynthesis, glutamate => proline [PATH:bit01100] bit_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:bit01100] bit_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bit01100] bit_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bit01100] bit_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:bit01100] bit_M00021   Cysteine biosynthesis, serine => cysteine [PATH:bit01100] bit_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bit01100] bit_M00026   Histidine biosynthesis, PRPP => histidine [PATH:bit01100] bit_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:bit01100] bit_M00034   Methionine salvage pathway [PATH:bit01100] bit_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:bit01100] bit_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bit01100] bit_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bit01100] bit_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bit01100] bit_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bit01100] bit_M00082   Fatty acid biosynthesis, initiation [PATH:bit01100] bit_M00083   Fatty acid biosynthesis, elongation [PATH:bit01100] bit_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:bit01100] bit_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:bit01100] bit_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:bit01100] bit_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bit01100] bit_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:bit01100] bit_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bit01100] bit_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:bit01100] bit_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:bit01100] bit_M00135   GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:bit01100] bit_M00151   Cytochrome bc1 complex respiratory unit [PATH:bit01100] bit_M00155   Cytochrome c oxidase, prokaryotes [PATH:bit01100] bit_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:bit01100] bit_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:bit01100] bit_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bit01100] bit_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:bit01100] bit_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:bit01100] bit_M00416   Cytochrome aa3-600 menaquinol oxidase [PATH:bit01100] bit_M00525   Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:bit01100] bit_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:bit01100] bit_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bit01100] bit_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:bit01100] bit_M00555   Betaine biosynthesis, choline => betaine [PATH:bit01100] bit_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bit01100] bit_M00573   Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin [PATH:bit01100] bit_M00577   Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:bit01100] bit_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:bit01100] bit_M00609   Cysteine biosynthesis, methionine => cysteine [PATH:bit01100] bit_M00621   Glycine cleavage system [PATH:bit01100] bit_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:bit01100] bit_M00787   Bacilysin biosynthesis, prephenate => bacilysin [PATH:bit01100] bit_M00793   dTDP-L-rhamnose biosynthesis [PATH:bit01100] bit_M00844   Arginine biosynthesis, ornithine => arginine [PATH:bit01100] bit_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bit01100] bit_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bit01100] bit_M00877   Kanosamine biosynthesis, glucose 6-phosphate => kanosamine [PATH:bit01100] bit_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bit01100] bit_M00883   Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bit01100] bit_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:bit01100] bit_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bit01100] bit_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bit01100] bit_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bit01100] bit_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:bit01100] bit_M00970   Proline degradation, proline => glutamate [PATH:bit01100] bit_M00972   Proline metabolism [PATH:bit01100] Organism Bacillus spizizenii [GN:bit] Related pathway bit00010   Glycolysis / Gluconeogenesis bit00020   Citrate cycle (TCA cycle) bit00030   Pentose phosphate pathway bit00040   Pentose and glucuronate interconversions bit00051   Fructose and mannose metabolism bit00052   Galactose metabolism bit00053   Ascorbate and aldarate metabolism bit00061   Fatty acid biosynthesis bit00071   Fatty acid degradation bit00130   Ubiquinone and other terpenoid-quinone biosynthesis bit00190   Oxidative phosphorylation bit00220   Arginine biosynthesis bit00230   Purine metabolism bit00240   Pyrimidine metabolism bit00250   Alanine, aspartate and glutamate metabolism bit00260   Glycine, serine and threonine metabolism bit00261   Monobactam biosynthesis bit00270   Cysteine and methionine metabolism bit00280   Valine, leucine and isoleucine degradation bit00290   Valine, leucine and isoleucine biosynthesis bit00300   Lysine biosynthesis bit00310   Lysine degradation bit00311   Penicillin and cephalosporin biosynthesis bit00330   Arginine and proline metabolism bit00332   Carbapenem biosynthesis bit00340   Histidine metabolism bit00350   Tyrosine metabolism bit00360   Phenylalanine metabolism bit00361   Chlorocyclohexane and chlorobenzene degradation bit00362   Benzoate degradation bit00380   Tryptophan metabolism bit00400   Phenylalanine, tyrosine and tryptophan biosynthesis bit00401   Novobiocin biosynthesis bit00410   beta-Alanine metabolism bit00430   Taurine and hypotaurine metabolism bit00450   Selenocompound metabolism bit00460   Cyanoamino acid metabolism bit00470   D-Amino acid metabolism bit00480   Glutathione metabolism bit00500   Starch and sucrose metabolism bit00511   Other glycan degradation bit00520   Amino sugar and nucleotide sugar metabolism bit00521   Streptomycin biosynthesis bit00523   Polyketide sugar unit biosynthesis bit00525   Acarbose and validamycin biosynthesis bit00541   O-Antigen nucleotide sugar biosynthesis bit00542   O-Antigen repeat unit biosynthesis bit00543   Exopolysaccharide biosynthesis bit00550   Peptidoglycan biosynthesis bit00552   Teichoic acid biosynthesis bit00561   Glycerolipid metabolism bit00562   Inositol phosphate metabolism bit00564   Glycerophospholipid metabolism bit00592   alpha-Linolenic acid metabolism bit00600   Sphingolipid metabolism bit00620   Pyruvate metabolism bit00621   Dioxin degradation bit00622   Xylene degradation bit00625   Chloroalkane and chloroalkene degradation bit00626   Naphthalene degradation bit00627   Aminobenzoate degradation bit00630   Glyoxylate and dicarboxylate metabolism bit00640   Propanoate metabolism bit00650   Butanoate metabolism bit00660   C5-Branched dibasic acid metabolism bit00670   One carbon pool by folate bit00680   Methane metabolism bit00730   Thiamine metabolism bit00740   Riboflavin metabolism bit00750   Vitamin B6 metabolism bit00760   Nicotinate and nicotinamide metabolism bit00770   Pantothenate and CoA biosynthesis bit00780   Biotin metabolism bit00785   Lipoic acid metabolism bit00790   Folate biosynthesis bit00860   Porphyrin metabolism bit00900   Terpenoid backbone biosynthesis bit00906   Carotenoid biosynthesis bit00907   Pinene, camphor and geraniol degradation bit00910   Nitrogen metabolism bit00920   Sulfur metabolism bit00998   Biosynthesis of various antibiotics bit00999   Biosynthesis of various plant secondary metabolites bit01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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