PATHWAY: bmar01100 Help Entry bmar01100                   Pathway                                 Name Metabolic pathways - Bermanella marisrubri Class BRITE hierarchy Pathway map bmar01100   Metabolic pathways Module bmar_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bmar01100] bmar_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:bmar01100] bmar_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bmar01100] bmar_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:bmar01100] bmar_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:bmar01100] bmar_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bmar01100] bmar_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bmar01100] bmar_M00015   Proline biosynthesis, glutamate => proline [PATH:bmar01100] bmar_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:bmar01100] bmar_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bmar01100] bmar_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bmar01100] bmar_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:bmar01100] bmar_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bmar01100] bmar_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:bmar01100] bmar_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:bmar01100] bmar_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:bmar01100] bmar_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:bmar01100] bmar_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bmar01100] bmar_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bmar01100] bmar_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bmar01100] bmar_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bmar01100] bmar_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bmar01100] bmar_M00063   CMP-KDO biosynthesis [PATH:bmar01100] bmar_M00083   Fatty acid biosynthesis, elongation [PATH:bmar01100] bmar_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:bmar01100] bmar_M00087   beta-Oxidation [PATH:bmar01100] bmar_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:bmar01100] bmar_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bmar01100] bmar_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:bmar01100] bmar_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:bmar01100] bmar_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bmar01100] bmar_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:bmar01100] bmar_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:bmar01100] bmar_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bmar01100] bmar_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:bmar01100] bmar_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bmar01100] bmar_M00149   Succinate dehydrogenase, prokaryotes [PATH:bmar01100] bmar_M00151   Cytochrome bc1 complex respiratory unit [PATH:bmar01100] bmar_M00155   Cytochrome c oxidase, prokaryotes [PATH:bmar01100] bmar_M00156   Cytochrome c oxidase, cbb3-type [PATH:bmar01100] bmar_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:bmar01100] bmar_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bmar01100] bmar_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bmar01100] bmar_M00555   Betaine biosynthesis, choline => betaine [PATH:bmar01100] bmar_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bmar01100] bmar_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:bmar01100] bmar_M00621   Glycine cleavage system [PATH:bmar01100] bmar_M00844   Arginine biosynthesis, ornithine => arginine [PATH:bmar01100] bmar_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bmar01100] bmar_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bmar01100] bmar_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:bmar01100] bmar_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:bmar01100] bmar_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:bmar01100] bmar_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:bmar01100] bmar_M00970   Proline degradation, proline => glutamate [PATH:bmar01100] Organism Bermanella marisrubri [GN:bmar] Related pathway bmar00010   Glycolysis / Gluconeogenesis bmar00020   Citrate cycle (TCA cycle) bmar00030   Pentose phosphate pathway bmar00040   Pentose and glucuronate interconversions bmar00051   Fructose and mannose metabolism bmar00052   Galactose metabolism bmar00061   Fatty acid biosynthesis bmar00071   Fatty acid degradation bmar00130   Ubiquinone and other terpenoid-quinone biosynthesis bmar00190   Oxidative phosphorylation bmar00220   Arginine biosynthesis bmar00230   Purine metabolism bmar00240   Pyrimidine metabolism bmar00250   Alanine, aspartate and glutamate metabolism bmar00260   Glycine, serine and threonine metabolism bmar00261   Monobactam biosynthesis bmar00270   Cysteine and methionine metabolism bmar00280   Valine, leucine and isoleucine degradation bmar00290   Valine, leucine and isoleucine biosynthesis bmar00300   Lysine biosynthesis bmar00310   Lysine degradation bmar00330   Arginine and proline metabolism bmar00332   Carbapenem biosynthesis bmar00340   Histidine metabolism bmar00350   Tyrosine metabolism bmar00360   Phenylalanine metabolism bmar00361   Chlorocyclohexane and chlorobenzene degradation bmar00362   Benzoate degradation bmar00380   Tryptophan metabolism bmar00400   Phenylalanine, tyrosine and tryptophan biosynthesis bmar00401   Novobiocin biosynthesis bmar00410   beta-Alanine metabolism bmar00430   Taurine and hypotaurine metabolism bmar00450   Selenocompound metabolism bmar00460   Cyanoamino acid metabolism bmar00470   D-Amino acid metabolism bmar00480   Glutathione metabolism bmar00500   Starch and sucrose metabolism bmar00520   Amino sugar and nucleotide sugar metabolism bmar00521   Streptomycin biosynthesis bmar00523   Polyketide sugar unit biosynthesis bmar00525   Acarbose and validamycin biosynthesis bmar00540   Lipopolysaccharide biosynthesis bmar00541   O-Antigen nucleotide sugar biosynthesis bmar00543   Exopolysaccharide biosynthesis bmar00550   Peptidoglycan biosynthesis bmar00552   Teichoic acid biosynthesis bmar00561   Glycerolipid metabolism bmar00562   Inositol phosphate metabolism bmar00564   Glycerophospholipid metabolism bmar00565   Ether lipid metabolism bmar00592   alpha-Linolenic acid metabolism bmar00620   Pyruvate metabolism bmar00625   Chloroalkane and chloroalkene degradation bmar00626   Naphthalene degradation bmar00627   Aminobenzoate degradation bmar00630   Glyoxylate and dicarboxylate metabolism bmar00633   Nitrotoluene degradation bmar00640   Propanoate metabolism bmar00650   Butanoate metabolism bmar00660   C5-Branched dibasic acid metabolism bmar00670   One carbon pool by folate bmar00680   Methane metabolism bmar00730   Thiamine metabolism bmar00740   Riboflavin metabolism bmar00750   Vitamin B6 metabolism bmar00760   Nicotinate and nicotinamide metabolism bmar00770   Pantothenate and CoA biosynthesis bmar00780   Biotin metabolism bmar00785   Lipoic acid metabolism bmar00790   Folate biosynthesis bmar00791   Atrazine degradation bmar00860   Porphyrin metabolism bmar00900   Terpenoid backbone biosynthesis bmar00907   Pinene, camphor and geraniol degradation bmar00910   Nitrogen metabolism bmar00920   Sulfur metabolism bmar00930   Caprolactam degradation bmar00999   Biosynthesis of various plant secondary metabolites bmar01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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